Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 AC020658.7-201ENST00000624274 2442 ntBASIC16.76■□□□□ 0.27
TPM3P06753 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM3P06753 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TPM3P06753 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 AL627223.1-201ENST00000416693 442 ntBASIC16.76■□□□□ 0.27
TPM3P06753 CEND1P1-201ENST00000451006 455 ntBASIC16.76■□□□□ 0.27
TPM3P06753 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.76■□□□□ 0.27
TPM3P06753 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.76■□□□□ 0.27
TPM3P06753 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.76■□□□□ 0.27
TPM3P06753 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.76■□□□□ 0.27
TPM3P06753 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM3P06753 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TPM3P06753 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TPM3P06753 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TPM3P06753 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.76■□□□□ 0.27
TPM3P06753 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC16.76■□□□□ 0.27
TPM3P06753 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TPM3P06753 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM3P06753 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TPM3P06753 AL360270.3-201ENST00000609118 1348 ntBASIC16.75■□□□□ 0.27
TPM3P06753 CROT-203ENST00000419147 2959 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM3P06753 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TPM3P06753 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TPM3P06753 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.75■□□□□ 0.27
TPM3P06753 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TPM3P06753 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.75■□□□□ 0.27
TPM3P06753 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.75■□□□□ 0.27
TPM3P06753 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM3P06753 FAM58DP-201ENST00000428076 619 ntBASIC16.75■□□□□ 0.27
TPM3P06753 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM3P06753 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.75■□□□□ 0.27
TPM3P06753 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TPM3P06753 AC004066.1-201ENST00000502488 802 ntBASIC16.75■□□□□ 0.27
TPM3P06753 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.75■□□□□ 0.27
TPM3P06753 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TPM3P06753 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
TPM3P06753 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TPM3P06753 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
TPM3P06753 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.75■□□□□ 0.27
TPM3P06753 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TPM3P06753 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TPM3P06753 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.74■□□□□ 0.27
TPM3P06753 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms