Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOA1P02647 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOA1P02647 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.35□□□□□ -0.27
APOA1P02647 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
APOA1P02647 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
APOA1P02647 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC13.34□□□□□ -0.27
APOA1P02647 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.34□□□□□ -0.27
APOA1P02647 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 IGLL3P-201ENST00000412472 434 ntBASIC13.34□□□□□ -0.27
APOA1P02647 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 TSPY19P-201ENST00000418461 509 ntBASIC13.34□□□□□ -0.27
APOA1P02647 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 TSPY18P-201ENST00000441642 509 ntBASIC13.34□□□□□ -0.27
APOA1P02647 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 RNPS1P1-201ENST00000507437 918 ntBASIC13.34□□□□□ -0.27
APOA1P02647 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
APOA1P02647 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.34□□□□□ -0.27
APOA1P02647 AC096734.2-201ENST00000562054 433 ntBASIC13.34□□□□□ -0.27
APOA1P02647 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.34□□□□□ -0.27
APOA1P02647 AC091304.2-201ENST00000564639 760 ntBASIC13.34□□□□□ -0.27
APOA1P02647 AL049597.2-201ENST00000565575 961 ntBASIC13.34□□□□□ -0.27
APOA1P02647 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.34□□□□□ -0.27
APOA1P02647 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 AC066615.1-201ENST00000640911 628 ntBASIC13.34□□□□□ -0.27
APOA1P02647 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
APOA1P02647 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.34□□□□□ -0.27
APOA1P02647 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 FOXO1B-201ENST00000504678 1527 ntBASIC13.34□□□□□ -0.27
APOA1P02647 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
APOA1P02647 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOA1P02647 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOA1P02647 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
APOA1P02647 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOA1P02647 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.33□□□□□ -0.27
APOA1P02647 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
APOA1P02647 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOA1P02647 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
APOA1P02647 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
APOA1P02647 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 AC007787.1-201ENST00000588095 1583 ntBASIC13.33□□□□□ -0.28
APOA1P02647 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
APOA1P02647 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.33□□□□□ -0.28
APOA1P02647 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
APOA1P02647 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms