Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CPNE6O95741 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 AC079178.1-201ENST00000420915 656 ntBASIC14.66□□□□□ -0.06
CPNE6O95741 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.66□□□□□ -0.06
CPNE6O95741 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.66□□□□□ -0.06
CPNE6O95741 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.66□□□□□ -0.06
CPNE6O95741 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.66□□□□□ -0.06
CPNE6O95741 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.66□□□□□ -0.06
CPNE6O95741 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CPNE6O95741 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.66□□□□□ -0.06
CPNE6O95741 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.66□□□□□ -0.06
CPNE6O95741 AC244452.3-201ENST00000636814 210 ntBASIC14.66□□□□□ -0.06
CPNE6O95741 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.66□□□□□ -0.06
CPNE6O95741 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CPNE6O95741 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE6O95741 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE6O95741 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.66□□□□□ -0.06
CPNE6O95741 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.66□□□□□ -0.06
CPNE6O95741 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE6O95741 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE6O95741 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CPNE6O95741 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.65□□□□□ -0.06
CPNE6O95741 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CPNE6O95741 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE6O95741 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CPNE6O95741 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CPNE6O95741 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE6O95741 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.65□□□□□ -0.06
CPNE6O95741 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CPNE6O95741 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.65□□□□□ -0.06
CPNE6O95741 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE6O95741 EIF3FP3-201ENST00000434851 1086 ntBASIC14.65□□□□□ -0.06
CPNE6O95741 COX5BP1-201ENST00000507622 393 ntBASIC14.65□□□□□ -0.06
CPNE6O95741 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.65□□□□□ -0.06
CPNE6O95741 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE6O95741 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.65□□□□□ -0.06
CPNE6O95741 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 AC136759.1-202ENST00000530858 2194 ntBASIC14.65□□□□□ -0.06
CPNE6O95741 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.65□□□□□ -0.06
CPNE6O95741 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CPNE6O95741 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE6O95741 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE6O95741 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE6O95741 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CPNE6O95741 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.65□□□□□ -0.06
CPNE6O95741 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.65□□□□□ -0.07
CPNE6O95741 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.07
CPNE6O95741 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.65□□□□□ -0.07
CPNE6O95741 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CPNE6O95741 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE6O95741 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CPNE6O95741 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.64□□□□□ -0.07
CPNE6O95741 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CPNE6O95741 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE6O95741 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.64□□□□□ -0.07
CPNE6O95741 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE6O95741 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CPNE6O95741 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CPNE6O95741 AL023775.1-201ENST00000454907 1746 ntBASIC14.64□□□□□ -0.07
CPNE6O95741 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms