Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 AC004899.1-201ENST00000424687 1714 ntBASIC17.67■□□□□ 0.42
MBD4O95243 KRT8P28-201ENST00000433288 1390 ntBASIC17.66■□□□□ 0.42
MBD4O95243 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MBD4O95243 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MBD4O95243 AL354702.1-201ENST00000442006 1960 ntBASIC17.66■□□□□ 0.42
MBD4O95243 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD4O95243 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD4O95243 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MBD4O95243 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 AL645933.1-201ENST00000440087 609 ntBASIC17.66■□□□□ 0.42
MBD4O95243 TUBB8P8-201ENST00000458717 1058 ntBASIC17.66■□□□□ 0.42
MBD4O95243 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.66■□□□□ 0.42
MBD4O95243 RPL18P13-201ENST00000478088 569 ntBASIC17.66■□□□□ 0.42
MBD4O95243 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.66■□□□□ 0.42
MBD4O95243 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MBD4O95243 AC005962.1-201ENST00000584100 773 ntBASIC17.66■□□□□ 0.42
MBD4O95243 AC005324.6-201ENST00000587972 613 ntBASIC17.66■□□□□ 0.42
MBD4O95243 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 AC139712.1-201ENST00000378256 1875 ntBASIC17.66■□□□□ 0.42
MBD4O95243 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD4O95243 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MBD4O95243 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD4O95243 AL008718.2-201ENST00000609206 1313 ntBASIC17.66■□□□□ 0.42
MBD4O95243 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.66■□□□□ 0.42
MBD4O95243 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
MBD4O95243 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD4O95243 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MBD4O95243 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MBD4O95243 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MBD4O95243 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MBD4O95243 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.65■□□□□ 0.42
MBD4O95243 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MBD4O95243 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.65■□□□□ 0.42
MBD4O95243 AL157407.1-201ENST00000435784 904 ntBASIC17.65■□□□□ 0.42
MBD4O95243 AL035414.1-201ENST00000451327 857 ntBASIC17.65■□□□□ 0.42
MBD4O95243 AC104073.2-201ENST00000453737 312 ntBASIC17.65■□□□□ 0.42
MBD4O95243 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.65■□□□□ 0.42
MBD4O95243 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.65■□□□□ 0.42
MBD4O95243 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.65■□□□□ 0.42
MBD4O95243 AC103988.2-201ENST00000561804 725 ntBASIC17.65■□□□□ 0.42
MBD4O95243 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MBD4O95243 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.65■□□□□ 0.42
MBD4O95243 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.65■□□□□ 0.42
MBD4O95243 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.65■□□□□ 0.42
MBD4O95243 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MBD4O95243 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.65■□□□□ 0.42
MBD4O95243 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 AC015688.4-201ENST00000580780 1647 ntBASIC17.65■□□□□ 0.42
MBD4O95243 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MBD4O95243 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MBD4O95243 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.64■□□□□ 0.42
MBD4O95243 MBLAC2-202ENST00000514906 1936 ntBASIC17.64■□□□□ 0.42
MBD4O95243 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.64■□□□□ 0.42
MBD4O95243 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MBD4O95243 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
MBD4O95243 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MBD4O95243 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms