Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK1BO75841 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 AC115284.2-201ENST00000624646 2054 ntBASIC12.97□□□□□ -0.33
UPK1BO75841 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK1BO75841 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
UPK1BO75841 AC073508.3-201ENST00000619697 1419 ntBASIC12.96□□□□□ -0.33
UPK1BO75841 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
UPK1BO75841 MARK2P9-201ENST00000430958 1727 ntBASIC12.96□□□□□ -0.33
UPK1BO75841 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
UPK1BO75841 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
UPK1BO75841 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK1BO75841 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK1BO75841 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
UPK1BO75841 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK1BO75841 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK1BO75841 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
UPK1BO75841 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 RCN1P1-201ENST00000400413 996 ntBASIC12.96□□□□□ -0.33
UPK1BO75841 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 AP002383.4-201ENST00000442518 975 ntBASIC12.96□□□□□ -0.33
UPK1BO75841 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK1BO75841 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK1BO75841 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.96□□□□□ -0.33
UPK1BO75841 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK1BO75841 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.96□□□□□ -0.33
UPK1BO75841 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK1BO75841 AP002414.4-201ENST00000589764 1148 ntBASIC12.96□□□□□ -0.33
UPK1BO75841 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.96□□□□□ -0.33
UPK1BO75841 AC073389.1-201ENST00000595595 795 ntBASIC12.96□□□□□ -0.33
UPK1BO75841 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.96□□□□□ -0.33
UPK1BO75841 AC025181.2-201ENST00000606994 802 ntBASIC12.96□□□□□ -0.33
UPK1BO75841 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.96□□□□□ -0.33
UPK1BO75841 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK1BO75841 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK1BO75841 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.96□□□□□ -0.33
UPK1BO75841 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK1BO75841 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
UPK1BO75841 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK1BO75841 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UPK1BO75841 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
UPK1BO75841 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UPK1BO75841 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
UPK1BO75841 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UPK1BO75841 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
UPK1BO75841 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UPK1BO75841 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.96□□□□□ -0.34
UPK1BO75841 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
UPK1BO75841 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
UPK1BO75841 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK1BO75841 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UPK1BO75841 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK1BO75841 AC026271.4-201ENST00000578214 1833 ntBASIC12.95□□□□□ -0.34
UPK1BO75841 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.95□□□□□ -0.34
UPK1BO75841 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UPK1BO75841 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
UPK1BO75841 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK1BO75841 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.95□□□□□ -0.34
UPK1BO75841 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
UPK1BO75841 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK1BO75841 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UPK1BO75841 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK1BO75841 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.95□□□□□ -0.34
UPK1BO75841 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.95□□□□□ -0.34
UPK1BO75841 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.95□□□□□ -0.34
UPK1BO75841 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms