Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 SOCS2P1-201ENST00000417727 557 ntBASIC13.63□□□□□ -0.23
RNF13O43567 MYCLP2-201ENST00000449268 967 ntBASIC13.63□□□□□ -0.23
RNF13O43567 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.63□□□□□ -0.23
RNF13O43567 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.63□□□□□ -0.23
RNF13O43567 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.63□□□□□ -0.23
RNF13O43567 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.63□□□□□ -0.23
RNF13O43567 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RNF13O43567 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.63□□□□□ -0.23
RNF13O43567 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RNF13O43567 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.63□□□□□ -0.23
RNF13O43567 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RNF13O43567 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RNF13O43567 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RNF13O43567 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RNF13O43567 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RNF13O43567 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF13O43567 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.62□□□□□ -0.23
RNF13O43567 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 HLA-K-203ENST00000430151 1046 ntBASIC13.62□□□□□ -0.23
RNF13O43567 FAM207CP-201ENST00000443486 507 ntBASIC13.62□□□□□ -0.23
RNF13O43567 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 AC092552.1-201ENST00000547243 906 ntBASIC13.62□□□□□ -0.23
RNF13O43567 SPDYE22P-201ENST00000582158 798 ntBASIC13.62□□□□□ -0.23
RNF13O43567 LINC02560-201ENST00000596379 459 ntBASIC13.62□□□□□ -0.23
RNF13O43567 AC133539.2-201ENST00000604757 467 ntBASIC13.62□□□□□ -0.23
RNF13O43567 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.62□□□□□ -0.23
RNF13O43567 AC008761.3-201ENST00000624803 892 ntBASIC13.62□□□□□ -0.23
RNF13O43567 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
RNF13O43567 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
RNF13O43567 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RNF13O43567 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNF13O43567 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF13O43567 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF13O43567 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF13O43567 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.61□□□□□ -0.23
RNF13O43567 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RNF13O43567 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RNF13O43567 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF13O43567 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF13O43567 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNF13O43567 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.61□□□□□ -0.23
RNF13O43567 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF13O43567 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.61□□□□□ -0.23
RNF13O43567 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RNF13O43567 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNF13O43567 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms