Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC10.26□□□□□ -0.77
NDUFA1O15239 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
NDUFA1O15239 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.26□□□□□ -0.77
NDUFA1O15239 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 AC090505.1-201ENST00000430515 1834 ntBASIC10.26□□□□□ -0.77
NDUFA1O15239 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 AC018665.1-201ENST00000622927 1362 ntBASIC10.26□□□□□ -0.77
NDUFA1O15239 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
NDUFA1O15239 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC10.25□□□□□ -0.77
NDUFA1O15239 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
NDUFA1O15239 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 AL133267.1-201ENST00000398220 340 ntBASIC10.25□□□□□ -0.77
NDUFA1O15239 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.25□□□□□ -0.77
NDUFA1O15239 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.25□□□□□ -0.77
NDUFA1O15239 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 BANF1P1-201ENST00000553684 263 ntBASIC10.25□□□□□ -0.77
NDUFA1O15239 AC026150.2-201ENST00000564693 1156 ntBASIC10.25□□□□□ -0.77
NDUFA1O15239 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 AC015910.1-201ENST00000579400 975 ntBASIC10.25□□□□□ -0.77
NDUFA1O15239 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC10.25□□□□□ -0.77
NDUFA1O15239 AC009093.7-201ENST00000623853 1223 ntBASIC10.25□□□□□ -0.77
NDUFA1O15239 AGGF1P1-201ENST00000509500 2073 ntBASIC10.25□□□□□ -0.77
NDUFA1O15239 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
NDUFA1O15239 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NDUFA1O15239 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
NDUFA1O15239 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.25□□□□□ -0.77
NDUFA1O15239 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
NDUFA1O15239 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
NDUFA1O15239 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 REXO1L1P-201ENST00000379010 6598 ntBASIC10.24□□□□□ -0.77
NDUFA1O15239 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
NDUFA1O15239 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NDUFA1O15239 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.24□□□□□ -0.77
NDUFA1O15239 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC10.24□□□□□ -0.77
NDUFA1O15239 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.24□□□□□ -0.77
NDUFA1O15239 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
NDUFA1O15239 FAM58DP-201ENST00000428076 619 ntBASIC10.24□□□□□ -0.77
NDUFA1O15239 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.24□□□□□ -0.77
NDUFA1O15239 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.24□□□□□ -0.77
NDUFA1O15239 YBX1P5-201ENST00000509441 847 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms