Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
O00370 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.89■□□□□ 0.14
O00370 LINC01230-201ENST00000625222 3017 ntBASIC15.89■□□□□ 0.13
O00370 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.89■□□□□ 0.13
O00370 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 AC011840.2-201ENST00000563063 1520 ntBASIC15.89■□□□□ 0.13
O00370 PCDHA3-202ENST00000532566 4594 ntBASIC15.89■□□□□ 0.13
O00370 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
O00370 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
O00370 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
O00370 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 INE2-201ENST00000630399 1874 ntBASIC15.89■□□□□ 0.13
O00370 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.89■□□□□ 0.13
O00370 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
O00370 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.89■□□□□ 0.13
O00370 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
O00370 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.89■□□□□ 0.13
O00370 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.89■□□□□ 0.13
O00370 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.89■□□□□ 0.13
O00370 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.89■□□□□ 0.13
O00370 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 CTBP2P5-201ENST00000454986 1264 ntBASIC15.89■□□□□ 0.13
O00370 GPR53P-205ENST00000457298 1084 ntBASIC15.89■□□□□ 0.13
O00370 AC106820.3-201ENST00000561653 397 ntBASIC15.89■□□□□ 0.13
O00370 AC239800.4-201ENST00000603712 296 ntBASIC15.89■□□□□ 0.13
O00370 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.89■□□□□ 0.13
O00370 RHOXF1P1-202ENST00000635473 501 ntBASIC15.89■□□□□ 0.13
O00370 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
O00370 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
O00370 AC126755.1-201ENST00000525846 6405 ntBASIC15.89■□□□□ 0.13
O00370 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 SALL4P5-201ENST00000419001 1760 ntBASIC15.89■□□□□ 0.13
O00370 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.89■□□□□ 0.13
O00370 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
O00370 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
O00370 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.88■□□□□ 0.13
O00370 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.88■□□□□ 0.13
O00370 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
O00370 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.88■□□□□ 0.13
O00370 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.88■□□□□ 0.13
O00370 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.88■□□□□ 0.13
O00370 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.88■□□□□ 0.13
O00370 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.88■□□□□ 0.13
O00370 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.88■□□□□ 0.13
O00370 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
O00370 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.88■□□□□ 0.13
O00370 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.88■□□□□ 0.13
O00370 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.88■□□□□ 0.13
O00370 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
O00370 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
O00370 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.88■□□□□ 0.13
O00370 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 FKBP4P6-201ENST00000457486 1332 ntBASIC15.88■□□□□ 0.13
O00370 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
O00370 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
O00370 AC113367.3-201ENST00000508316 1912 ntBASIC15.88■□□□□ 0.13
O00370 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.88■□□□□ 0.13
O00370 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
O00370 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.88■□□□□ 0.13
O00370 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
O00370 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.87■□□□□ 0.13
O00370 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
O00370 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
O00370 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
O00370 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms