Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 GHET1-201ENST00000627071 1906 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ST20-AS1-201ENST00000560255 4223 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 AC115284.2-201ENST00000624646 2054 ntBASIC10.48□□□□□ -0.73
LINC01546A6NGU7 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01546A6NGU7 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 AC003958.1-201ENST00000435883 421 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 KRT18P2-201ENST00000447938 1258 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 SPDYE11-202ENST00000450699 704 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 SPDYE9P-201ENST00000570642 692 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 AL049840.3-201ENST00000602669 611 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 LINC01115-203ENST00000606068 577 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 Z83851.2-201ENST00000609564 659 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 AC026120.1-201ENST00000611536 926 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 SPDYE10P-202ENST00000612005 668 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 SPDYE8P-202ENST00000612377 668 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 AC060814.4-201ENST00000594169 2163 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 AC003102.2-201ENST00000589195 1469 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 AC008620.2-201ENST00000510294 1569 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 MSNP1-201ENST00000511640 1732 ntBASIC10.47□□□□□ -0.73
LINC01546A6NGU7 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01546A6NGU7 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01546A6NGU7 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms