Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AF228730.8-201ENST00000642140 221 ntBASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 KRT8P12-202ENST00000472924 1397 ntBASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
KCNIP3Q9Y2W7 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 SAMD11P1-201ENST00000571429 661 ntBASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 AL691432.3-201ENST00000621860 400 ntBASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
KCNIP3Q9Y2W7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms