Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.67■□□□□ 0.26
COL20A1Q9P218 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL20A1Q9P218 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.67■□□□□ 0.26
COL20A1Q9P218 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL20A1Q9P218 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL20A1Q9P218 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL20A1Q9P218 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.67■□□□□ 0.26
COL20A1Q9P218 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COL20A1Q9P218 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL20A1Q9P218 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 AC007274.2-201ENST00000421675 662 ntBASIC16.66■□□□□ 0.26
COL20A1Q9P218 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 OR2R1P-201ENST00000441404 914 ntBASIC16.66■□□□□ 0.26
COL20A1Q9P218 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.66■□□□□ 0.26
COL20A1Q9P218 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 AC090857.1-201ENST00000527400 390 ntBASIC16.66■□□□□ 0.26
COL20A1Q9P218 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 MIR3907-201ENST00000579424 151 ntBASIC16.66■□□□□ 0.26
COL20A1Q9P218 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 AL354702.1-201ENST00000442006 1960 ntBASIC16.66■□□□□ 0.26
COL20A1Q9P218 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL20A1Q9P218 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
COL20A1Q9P218 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.65■□□□□ 0.26
COL20A1Q9P218 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 AL353770.1-201ENST00000614915 403 ntBASIC16.65■□□□□ 0.26
COL20A1Q9P218 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 LINC01165-201ENST00000445190 1623 ntBASIC16.65■□□□□ 0.26
COL20A1Q9P218 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 DBET-201ENST00000630918 3363 ntBASIC16.65■□□□□ 0.26
COL20A1Q9P218 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL20A1Q9P218 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL20A1Q9P218 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.64■□□□□ 0.26
COL20A1Q9P218 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
COL20A1Q9P218 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL20A1Q9P218 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms