Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 SALL4P5-201ENST00000419001 1760 ntBASIC14.16□□□□□ -0.14
KCMF1Q9P0J7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KCMF1Q9P0J7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KCMF1Q9P0J7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCMF1Q9P0J7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KCMF1Q9P0J7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KCMF1Q9P0J7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KCMF1Q9P0J7 FKBP4P6-201ENST00000457486 1332 ntBASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 AL365209.1-201ENST00000624418 6473 ntBASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 AL391280.1-201ENST00000506969 1062 ntBASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 AC104989.1-201ENST00000519711 778 ntBASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 MIR6752-201ENST00000618442 71 ntBASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 AC011840.2-201ENST00000563063 1520 ntBASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 AL137784.3-201ENST00000623858 2288 ntBASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 AC139749.1-202ENST00000617529 3139 ntBASIC14.15□□□□□ -0.14
KCMF1Q9P0J7 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
KCMF1Q9P0J7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.15□□□□□ -0.15
KCMF1Q9P0J7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 CTBP2P5-201ENST00000454986 1264 ntBASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AP003171.2-201ENST00000528208 925 ntBASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AC106820.3-201ENST00000561653 397 ntBASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 AC133552.6-201ENST00000613406 534 ntBASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.14□□□□□ -0.15
KCMF1Q9P0J7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms