Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CHMP1AP1-201ENST00000445563 662 ntBASIC15.86■□□□□ 0.13
CISHQ9NSE2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.86■□□□□ 0.13
CISHQ9NSE2 HOMER2P2-201ENST00000451621 847 ntBASIC15.86■□□□□ 0.13
CISHQ9NSE2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.86■□□□□ 0.13
CISHQ9NSE2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.86■□□□□ 0.13
CISHQ9NSE2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.86■□□□□ 0.13
CISHQ9NSE2 AL358472.3-201ENST00000608147 415 ntBASIC15.86■□□□□ 0.13
CISHQ9NSE2 AP001002.3-201ENST00000623482 206 ntBASIC15.86■□□□□ 0.13
CISHQ9NSE2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CISHQ9NSE2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CISHQ9NSE2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.86■□□□□ 0.13
CISHQ9NSE2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.86■□□□□ 0.13
CISHQ9NSE2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CISHQ9NSE2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CISHQ9NSE2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 PUDPP3-201ENST00000445368 636 ntBASIC15.85■□□□□ 0.13
CISHQ9NSE2 AL355994.2-201ENST00000447882 704 ntBASIC15.85■□□□□ 0.13
CISHQ9NSE2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 FAM45BP-202ENST00000592932 1624 ntBASIC15.85■□□□□ 0.13
CISHQ9NSE2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CISHQ9NSE2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CISHQ9NSE2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 TPT1P11-201ENST00000458482 498 ntBASIC15.84■□□□□ 0.13
CISHQ9NSE2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 AC022447.6-201ENST00000515522 438 ntBASIC15.84■□□□□ 0.13
CISHQ9NSE2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CISHQ9NSE2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.84■□□□□ 0.13
CISHQ9NSE2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms