Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ATP11AUN-201ENST00000623100 2241 ntTSL 2 BASIC7.42□□□□□ -1.22
CDC42SE1Q9NRR8 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 IRF5-213ENST00000489702 2988 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 UNC45B-202ENST00000394570 5638 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 KBTBD12-203ENST00000405256 5268 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 ZNF493-208ENST00000599461 1769 ntBASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 PSAPL1-201ENST00000319098 4680 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 PAX6-208ENST00000379132 2576 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 AL354702.1-201ENST00000442006 1960 ntBASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 AGGF1P1-201ENST00000509500 2073 ntBASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 ARL3-201ENST00000260746 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 RER1-204ENST00000378518 522 ntTSL 3 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 KRT18P23-201ENST00000435622 1283 ntBASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 NME3-204ENST00000563498 920 ntTSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 MIR3180-5-201ENST00000583743 153 ntBASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 AC016405.3-201ENST00000607710 860 ntBASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 VAC14-AS1-202ENST00000562507 4853 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 NPC1L1-201ENST00000289547 5048 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 TPCN1-204ENST00000541517 5173 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 RAD52-204ENST00000430095 2366 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 CYP1A1-209ENST00000612821 2402 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 EFHC1-201ENST00000371068 6987 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CDC42SE1Q9NRR8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 PASK-215ENST00000544142 4724 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 C3AR1-201ENST00000307637 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC7.4□□□□□ -1.22
CDC42SE1Q9NRR8 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms