Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.84□□□□□ -0.35
GFI1Q99684 AC004945.1-201ENST00000416738 983 ntBASIC12.84□□□□□ -0.35
GFI1Q99684 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.84□□□□□ -0.35
GFI1Q99684 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 SPDYE18-201ENST00000510091 1050 ntBASIC12.84□□□□□ -0.35
GFI1Q99684 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 AC109322.1-201ENST00000524499 1264 ntBASIC12.84□□□□□ -0.35
GFI1Q99684 AC092865.5-201ENST00000545435 363 ntBASIC12.84□□□□□ -0.35
GFI1Q99684 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 AC027612.4-201ENST00000605371 583 ntBASIC12.84□□□□□ -0.35
GFI1Q99684 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.84□□□□□ -0.35
GFI1Q99684 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
GFI1Q99684 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.84□□□□□ -0.35
GFI1Q99684 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.84□□□□□ -0.35
GFI1Q99684 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.84□□□□□ -0.35
GFI1Q99684 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
GFI1Q99684 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GFI1Q99684 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.84□□□□□ -0.35
GFI1Q99684 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
GFI1Q99684 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
GFI1Q99684 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
GFI1Q99684 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
GFI1Q99684 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
GFI1Q99684 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.83□□□□□ -0.35
GFI1Q99684 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
GFI1Q99684 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
GFI1Q99684 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
GFI1Q99684 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.83□□□□□ -0.36
GFI1Q99684 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
GFI1Q99684 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
GFI1Q99684 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
GFI1Q99684 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
GFI1Q99684 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.83□□□□□ -0.36
GFI1Q99684 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.83□□□□□ -0.36
GFI1Q99684 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.83□□□□□ -0.36
GFI1Q99684 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.83□□□□□ -0.36
GFI1Q99684 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.83□□□□□ -0.36
GFI1Q99684 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.83□□□□□ -0.36
GFI1Q99684 AC092580.3-201ENST00000430932 139 ntBASIC12.83□□□□□ -0.36
GFI1Q99684 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 AC112482.1-201ENST00000492080 688 ntBASIC12.83□□□□□ -0.36
GFI1Q99684 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.83□□□□□ -0.36
GFI1Q99684 AC131206.1-201ENST00000538078 1211 ntBASIC12.83□□□□□ -0.36
GFI1Q99684 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.83□□□□□ -0.36
GFI1Q99684 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.83□□□□□ -0.36
GFI1Q99684 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.83□□□□□ -0.36
GFI1Q99684 AL049840.4-201ENST00000602422 811 ntBASIC12.83□□□□□ -0.36
GFI1Q99684 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.83□□□□□ -0.36
GFI1Q99684 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
GFI1Q99684 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.83□□□□□ -0.36
GFI1Q99684 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
GFI1Q99684 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
GFI1Q99684 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.83□□□□□ -0.36
GFI1Q99684 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.83□□□□□ -0.36
GFI1Q99684 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
GFI1Q99684 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.83□□□□□ -0.36
GFI1Q99684 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.83□□□□□ -0.36
GFI1Q99684 MRPL37P1-201ENST00000592451 1337 ntBASIC12.83□□□□□ -0.36
GFI1Q99684 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GFI1Q99684 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms