Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HAPLN3Q96S86 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HAPLN3Q96S86 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.43■□□□□ 0.06
HAPLN3Q96S86 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HAPLN3Q96S86 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HAPLN3Q96S86 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.43■□□□□ 0.06
HAPLN3Q96S86 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 AL355994.2-201ENST00000447882 704 ntBASIC15.42■□□□□ 0.06
HAPLN3Q96S86 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 AC009093.2-202ENST00000620513 2079 ntBASIC15.42■□□□□ 0.06
HAPLN3Q96S86 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 MRPL37P1-201ENST00000592451 1337 ntBASIC15.42■□□□□ 0.06
HAPLN3Q96S86 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HAPLN3Q96S86 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 MTHFR-210ENST00000641407 2387 ntBASIC15.41■□□□□ 0.06
HAPLN3Q96S86 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 CHMP1AP1-201ENST00000445563 662 ntBASIC15.41■□□□□ 0.06
HAPLN3Q96S86 HOMER2P2-201ENST00000451621 847 ntBASIC15.41■□□□□ 0.06
HAPLN3Q96S86 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 AC002472.3-201ENST00000640124 621 ntBASIC15.41■□□□□ 0.06
HAPLN3Q96S86 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.41■□□□□ 0.06
HAPLN3Q96S86 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HAPLN3Q96S86 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HAPLN3Q96S86 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HAPLN3Q96S86 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HAPLN3Q96S86 AC092135.3-201ENST00000624151 1846 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms