Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 BX539320.1-201ENST00000623759 877 ntBASIC14.16□□□□□ -0.14
COL21A1Q96P44 AC105233.6-201ENST00000642093 218 ntBASIC14.16□□□□□ -0.14
COL21A1Q96P44 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
COL21A1Q96P44 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
COL21A1Q96P44 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 AP001582.1-201ENST00000525856 295 ntBASIC14.15□□□□□ -0.14
COL21A1Q96P44 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COL21A1Q96P44 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
COL21A1Q96P44 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
COL21A1Q96P44 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
COL21A1Q96P44 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 AL645937.2-201ENST00000396808 931 ntBASIC14.14□□□□□ -0.15
COL21A1Q96P44 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 NUS1P3-201ENST00000423502 862 ntBASIC14.14□□□□□ -0.15
COL21A1Q96P44 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COL21A1Q96P44 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.14□□□□□ -0.15
COL21A1Q96P44 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms