Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 AC020910.6-201ENST00000623084 1459 ntBASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 NFIC-211ENST00000641145 8399 ntBASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 FAM8A4P-201ENST00000435433 1213 ntBASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 BCRP2-202ENST00000447763 634 ntBASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 BCRP6-201ENST00000510112 632 ntBASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 BCRP7-201ENST00000511549 544 ntBASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 AP005018.1-201ENST00000525475 301 ntBASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 MIR3197-201ENST00000582241 73 ntBASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 AC008825.2-201ENST00000603374 718 ntBASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 AC009093.2-202ENST00000620513 2079 ntBASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PDLIM5Q96HC4 AC015656.1-201ENST00000624209 3578 ntBASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 TTTY23B-201ENST00000442790 549 ntBASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 AP003171.2-201ENST00000528208 925 ntBASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 AC132938.2-201ENST00000579188 680 ntBASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 ECM1P1-201ENST00000604092 1279 ntBASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 AL591163.1-201ENST00000641757 987 ntBASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDLIM5Q96HC4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms