Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 RNA5SP412-201ENST00000516234 123 ntBASIC16.78■□□□□ 0.28
TNFRSF25Q93038 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 AC009542.2-202ENST00000619004 1067 ntBASIC16.78■□□□□ 0.28
TNFRSF25Q93038 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.78■□□□□ 0.28
TNFRSF25Q93038 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 AC016397.2-201ENST00000624848 1985 ntBASIC16.77■□□□□ 0.28
TNFRSF25Q93038 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.77■□□□□ 0.28
TNFRSF25Q93038 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 AL157407.1-201ENST00000435784 904 ntBASIC16.77■□□□□ 0.28
TNFRSF25Q93038 ATP5G2P4-201ENST00000442175 420 ntBASIC16.77■□□□□ 0.28
TNFRSF25Q93038 YBX1P6-201ENST00000442962 1002 ntBASIC16.77■□□□□ 0.28
TNFRSF25Q93038 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 AL035414.1-201ENST00000451327 857 ntBASIC16.77■□□□□ 0.28
TNFRSF25Q93038 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 AC027237.1-201ENST00000560942 655 ntBASIC16.77■□□□□ 0.28
TNFRSF25Q93038 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TNFRSF25Q93038 AC244394.1-201ENST00000435000 1665 ntBASIC16.77■□□□□ 0.28
TNFRSF25Q93038 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF25Q93038 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.77■□□□□ 0.27
TNFRSF25Q93038 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF25Q93038 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF25Q93038 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.77■□□□□ 0.27
TNFRSF25Q93038 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.77■□□□□ 0.27
TNFRSF25Q93038 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TNFRSF25Q93038 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.77■□□□□ 0.27
TNFRSF25Q93038 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TNFRSF25Q93038 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 CICP16-201ENST00000502609 2813 ntBASIC16.76■□□□□ 0.27
TNFRSF25Q93038 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 AC079178.1-201ENST00000420915 656 ntBASIC16.76■□□□□ 0.27
TNFRSF25Q93038 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 AL354877.1-201ENST00000424412 413 ntBASIC16.76■□□□□ 0.27
TNFRSF25Q93038 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 AC244157.2-201ENST00000616239 1006 ntBASIC16.76■□□□□ 0.27
TNFRSF25Q93038 AL162426.1-201ENST00000624141 743 ntBASIC16.76■□□□□ 0.27
TNFRSF25Q93038 Z98259.2-201ENST00000641583 609 ntBASIC16.76■□□□□ 0.27
TNFRSF25Q93038 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms