Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.83□□□□□ -0.2
HPS1Q92902 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.83□□□□□ -0.2
HPS1Q92902 RN7SKP199-201ENST00000410325 305 ntBASIC13.83□□□□□ -0.2
HPS1Q92902 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC13.83□□□□□ -0.2
HPS1Q92902 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.83□□□□□ -0.2
HPS1Q92902 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.83□□□□□ -0.2
HPS1Q92902 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.83□□□□□ -0.2
HPS1Q92902 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.83□□□□□ -0.2
HPS1Q92902 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 AL365330.1-201ENST00000607459 531 ntBASIC13.83□□□□□ -0.2
HPS1Q92902 AL512356.3-201ENST00000623005 461 ntBASIC13.83□□□□□ -0.2
HPS1Q92902 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.83□□□□□ -0.2
HPS1Q92902 ZBED1P1-201ENST00000502364 1930 ntBASIC13.83□□□□□ -0.2
HPS1Q92902 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 AC005622.1-201ENST00000636801 1703 ntBASIC13.83□□□□□ -0.2
HPS1Q92902 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HPS1Q92902 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 AC131212.3-201ENST00000624087 4219 ntBASIC13.83□□□□□ -0.2
HPS1Q92902 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HPS1Q92902 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 FO538757.1-201ENST00000623083 1397 ntBASIC13.83□□□□□ -0.2
HPS1Q92902 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HPS1Q92902 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.83□□□□□ -0.2
HPS1Q92902 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HPS1Q92902 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.82□□□□□ -0.2
HPS1Q92902 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 HLA-H-201ENST00000383620 1096 ntBASIC13.82□□□□□ -0.2
HPS1Q92902 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HPS1Q92902 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HPS1Q92902 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.82□□□□□ -0.2
HPS1Q92902 TREML5P-201ENST00000421694 576 ntBASIC13.82□□□□□ -0.2
HPS1Q92902 EIF2S2P3-201ENST00000428356 999 ntBASIC13.82□□□□□ -0.2
HPS1Q92902 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 TSPY16P-201ENST00000449843 468 ntBASIC13.82□□□□□ -0.2
HPS1Q92902 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.82□□□□□ -0.2
HPS1Q92902 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.82□□□□□ -0.2
HPS1Q92902 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 SPTSSB-204ENST00000617024 1292 ntBASIC13.82□□□□□ -0.2
HPS1Q92902 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
HPS1Q92902 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.82□□□□□ -0.2
HPS1Q92902 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.82□□□□□ -0.2
HPS1Q92902 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.82□□□□□ -0.2
HPS1Q92902 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.82□□□□□ -0.2
HPS1Q92902 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HPS1Q92902 PEG13-201ENST00000631594 5667 ntBASIC13.81□□□□□ -0.2
HPS1Q92902 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.81□□□□□ -0.2
HPS1Q92902 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HPS1Q92902 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HPS1Q92902 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HPS1Q92902 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HPS1Q92902 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HPS1Q92902 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HPS1Q92902 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
HPS1Q92902 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.81□□□□□ -0.2
HPS1Q92902 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HPS1Q92902 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HPS1Q92902 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms