Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 AC090616.6-203ENST00000579186 1945 ntBASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 AL627231.1-201ENST00000394467 1125 ntBASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 FGFR3P1-201ENST00000449999 601 ntBASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 AC073150.1-201ENST00000450406 1084 ntBASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 RN7SL181P-201ENST00000462921 277 ntBASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 AC138035.3-201ENST00000622706 2791 ntBASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 AC099063.4-201ENST00000641099 1602 ntBASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 FAM90A2P-201ENST00000511144 1395 ntBASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 FAM90A25P-201ENST00000528404 1395 ntBASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.09■□□□□ 0.01
SYNPOQ8N3V7 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SYNPOQ8N3V7 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 MBLAC2-202ENST00000514906 1936 ntBASIC15.08■□□□□ 0
SYNPOQ8N3V7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.08■□□□□ 0
SYNPOQ8N3V7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SYNPOQ8N3V7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms