Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 HIST1H2APS2-201ENST00000454426 370 ntBASIC20.39■□□□□ 0.85
UBR1Q8IWV7 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 SLC25A15P3-201ENST00000505530 290 ntBASIC20.39■□□□□ 0.85
UBR1Q8IWV7 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBR1Q8IWV7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 AC064801.2-201ENST00000625052 1303 ntBASIC20.38■□□□□ 0.85
UBR1Q8IWV7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 ASS1P2-201ENST00000439895 1223 ntBASIC20.38■□□□□ 0.85
UBR1Q8IWV7 AC113347.2-201ENST00000512350 279 ntBASIC20.38■□□□□ 0.85
UBR1Q8IWV7 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC20.38■□□□□ 0.85
UBR1Q8IWV7 CR392039.1-201ENST00000623217 204 ntBASIC20.38■□□□□ 0.85
UBR1Q8IWV7 LTB4R2-202ENST00000528054 3092 ntBASIC20.38■□□□□ 0.85
UBR1Q8IWV7 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC20.38■□□□□ 0.85
UBR1Q8IWV7 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 CDCA4P4-201ENST00000435216 680 ntBASIC20.37■□□□□ 0.85
UBR1Q8IWV7 ZNF877P-201ENST00000437614 612 ntBASIC20.37■□□□□ 0.85
UBR1Q8IWV7 RNLS-203ENST00000437752 525 ntTSL 2 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 PMEL-214ENST00000550447 901 ntTSL 3 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 PRMT1P1-201ENST00000604252 1009 ntBASIC20.37■□□□□ 0.85
UBR1Q8IWV7 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
UBR1Q8IWV7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 FAM21EP-201ENST00000417804 985 ntBASIC20.36■□□□□ 0.85
UBR1Q8IWV7 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 HNRNPA1P42-201ENST00000458678 957 ntBASIC20.36■□□□□ 0.85
UBR1Q8IWV7 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 AC092612.1-201ENST00000514501 998 ntBASIC20.36■□□□□ 0.85
UBR1Q8IWV7 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 DUT-207ENST00000559416 635 ntTSL 2 BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 AC104506.1-201ENST00000609247 429 ntBASIC20.36■□□□□ 0.85
UBR1Q8IWV7 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBR1Q8IWV7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms