Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC003102.2-201ENST00000589195 1469 ntBASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 AC026748.1-201ENST00000624349 3251 ntBASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 AC010141.1-201ENST00000411585 623 ntBASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 BX284668.4-201ENST00000453917 508 ntBASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.8□□□□□ -0.2
H3F3CQ6NXT2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 AC139749.1-202ENST00000617529 3139 ntBASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 AC023090.2-201ENST00000625182 2110 ntBASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 SERPINA13P-202ENST00000478994 924 ntBASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 SCARNA20.5-201ENST00000516991 142 ntBASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 BX088702.1-201ENST00000610784 235 ntBASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 AL136301.1-201ENST00000615830 422 ntBASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 AC009093.2-202ENST00000620513 2079 ntBASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3F3CQ6NXT2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 AC020910.5-201ENST00000623668 1865 ntBASIC13.78□□□□□ -0.2
H3F3CQ6NXT2 AC023908.3-201ENST00000564211 3047 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms