Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 AC078819.1-201ENST00000547454 765 ntBASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 AC012085.1-201ENST00000548270 765 ntBASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.57■□□□□ 0.08
TTC39BQ5VTQ0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 YBX1P6-201ENST00000442962 1002 ntBASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 ECM1P1-201ENST00000604092 1279 ntBASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 AHCYP2-201ENST00000430630 1300 ntBASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TTC39BQ5VTQ0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 INTS4P1-203ENST00000641008 3683 ntBASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.55■□□□□ 0.08
TTC39BQ5VTQ0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms