Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 RN7SL774P-201ENST00000577467 290 ntBASIC15.79■□□□□ 0.12
VARS2Q5ST30 SPCS2P2-201ENST00000603270 608 ntBASIC15.79■□□□□ 0.12
VARS2Q5ST30 AP001505.2-201ENST00000616815 443 ntBASIC15.79■□□□□ 0.12
VARS2Q5ST30 AL136295.7-201ENST00000619226 1200 ntBASIC15.79■□□□□ 0.12
VARS2Q5ST30 AC006963.1-201ENST00000624003 1052 ntBASIC15.79■□□□□ 0.12
VARS2Q5ST30 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 AC068418.2-201ENST00000577309 3703 ntBASIC15.79■□□□□ 0.12
VARS2Q5ST30 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 ACE3P-201ENST00000423435 1973 ntBASIC15.78■□□□□ 0.12
VARS2Q5ST30 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AC007292.2-201ENST00000593524 1812 ntBASIC15.78■□□□□ 0.12
VARS2Q5ST30 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AL008718.2-201ENST00000609206 1313 ntBASIC15.78■□□□□ 0.12
VARS2Q5ST30 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AC012441.2-201ENST00000444843 739 ntBASIC15.78■□□□□ 0.12
VARS2Q5ST30 MTND1P31-201ENST00000449206 961 ntBASIC15.78■□□□□ 0.12
VARS2Q5ST30 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 RN7SL11P-201ENST00000471305 293 ntBASIC15.78■□□□□ 0.12
VARS2Q5ST30 TMEM198B-204ENST00000484016 896 ntBASIC15.78■□□□□ 0.12
VARS2Q5ST30 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 AC100757.4-201ENST00000626934 759 ntBASIC15.78■□□□□ 0.12
VARS2Q5ST30 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
VARS2Q5ST30 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 KRT8P19-201ENST00000551916 1455 ntBASIC15.78■□□□□ 0.12
VARS2Q5ST30 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VARS2Q5ST30 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 AC091951.1-201ENST00000512854 2465 ntBASIC15.77■□□□□ 0.12
VARS2Q5ST30 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VARS2Q5ST30 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VARS2Q5ST30 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 ZBED1P1-201ENST00000502364 1930 ntBASIC15.77■□□□□ 0.12
VARS2Q5ST30 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VARS2Q5ST30 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VARS2Q5ST30 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 VDAC1P1-201ENST00000439229 848 ntBASIC15.77■□□□□ 0.12
VARS2Q5ST30 PUDPP3-201ENST00000445368 636 ntBASIC15.77■□□□□ 0.12
VARS2Q5ST30 CICP12-201ENST00000455801 843 ntBASIC15.77■□□□□ 0.12
VARS2Q5ST30 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VARS2Q5ST30 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC15.77■□□□□ 0.12
VARS2Q5ST30 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms