Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC4Q5GLZ8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 AC007292.2-201ENST00000593524 1812 ntBASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 MIR663B-201ENST00000408361 115 ntBASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 BCRP2-202ENST00000447763 634 ntBASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 IGHJ2P-201ENST00000454480 60 ntBASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 BCRP6-201ENST00000510112 632 ntBASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 BCRP7-201ENST00000511549 544 ntBASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 AP001889.1-201ENST00000525414 633 ntBASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 AC079328.1-201ENST00000560358 952 ntBASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC4Q5GLZ8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.68■□□□□ 0.26
HERC4Q5GLZ8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.68■□□□□ 0.26
HERC4Q5GLZ8 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HERC4Q5GLZ8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC4Q5GLZ8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
HERC4Q5GLZ8 AC140479.7-201ENST00000636301 2332 ntBASIC16.68■□□□□ 0.26
HERC4Q5GLZ8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC4Q5GLZ8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HERC4Q5GLZ8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.68■□□□□ 0.26
HERC4Q5GLZ8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HERC4Q5GLZ8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HERC4Q5GLZ8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms