Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 BX088702.1-201ENST00000610784 235 ntBASIC18.23■□□□□ 0.51
ATP2B3Q16720 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP2B3Q16720 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2B3Q16720 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2B3Q16720 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP2B3Q16720 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP2B3Q16720 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2B3Q16720 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2B3Q16720 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2B3Q16720 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP2B3Q16720 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP2B3Q16720 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2B3Q16720 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2B3Q16720 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.23■□□□□ 0.51
ATP2B3Q16720 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 NKAIN1P1-201ENST00000435754 582 ntBASIC18.22■□□□□ 0.51
ATP2B3Q16720 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 AC008825.2-201ENST00000603374 718 ntBASIC18.22■□□□□ 0.51
ATP2B3Q16720 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.22■□□□□ 0.51
ATP2B3Q16720 AL023803.2-201ENST00000620080 638 ntBASIC18.22■□□□□ 0.51
ATP2B3Q16720 AC244452.3-201ENST00000636814 210 ntBASIC18.22■□□□□ 0.51
ATP2B3Q16720 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2B3Q16720 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP2B3Q16720 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 AC013726.1-201ENST00000563747 2285 ntBASIC18.21■□□□□ 0.51
ATP2B3Q16720 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B3Q16720 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B3Q16720 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B3Q16720 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B3Q16720 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B3Q16720 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 SCARNA20.5-201ENST00000516991 142 ntBASIC18.21■□□□□ 0.51
ATP2B3Q16720 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.21■□□□□ 0.51
ATP2B3Q16720 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 AC020914.3-201ENST00000594712 304 ntBASIC18.21■□□□□ 0.51
ATP2B3Q16720 AC132192.2-201ENST00000596206 1147 ntBASIC18.21■□□□□ 0.51
ATP2B3Q16720 AL139099.5-201ENST00000635274 300 ntBASIC18.21■□□□□ 0.51
ATP2B3Q16720 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B3Q16720 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B3Q16720 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2B3Q16720 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
ATP2B3Q16720 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms