Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 AC120045.2-201ENST00000567334 178 ntBASIC13.7□□□□□ -0.22
PUDPQ08623 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.7□□□□□ -0.22
PUDPQ08623 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.7□□□□□ -0.22
PUDPQ08623 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.7□□□□□ -0.22
PUDPQ08623 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.7□□□□□ -0.22
PUDPQ08623 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PUDPQ08623 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.7□□□□□ -0.22
PUDPQ08623 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.7□□□□□ -0.22
PUDPQ08623 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.7□□□□□ -0.22
PUDPQ08623 AC007431.3-201ENST00000623221 587 ntBASIC13.7□□□□□ -0.22
PUDPQ08623 AL158070.2-201ENST00000623713 1621 ntBASIC13.7□□□□□ -0.22
PUDPQ08623 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PUDPQ08623 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PUDPQ08623 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PUDPQ08623 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PUDPQ08623 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.7□□□□□ -0.22
PUDPQ08623 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PUDPQ08623 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.69□□□□□ -0.22
PUDPQ08623 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.69□□□□□ -0.22
PUDPQ08623 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.69□□□□□ -0.22
PUDPQ08623 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.69□□□□□ -0.22
PUDPQ08623 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.69□□□□□ -0.22
PUDPQ08623 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.69□□□□□ -0.22
PUDPQ08623 NUS1P3-201ENST00000423502 862 ntBASIC13.69□□□□□ -0.22
PUDPQ08623 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PUDPQ08623 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.69□□□□□ -0.22
PUDPQ08623 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.69□□□□□ -0.22
PUDPQ08623 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.69□□□□□ -0.22
PUDPQ08623 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.69□□□□□ -0.22
PUDPQ08623 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.69□□□□□ -0.22
PUDPQ08623 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.69□□□□□ -0.22
PUDPQ08623 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.69□□□□□ -0.22
PUDPQ08623 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 AL157414.3-201ENST00000624276 1954 ntBASIC13.69□□□□□ -0.22
PUDPQ08623 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.69□□□□□ -0.22
PUDPQ08623 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PUDPQ08623 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PUDPQ08623 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
PUDPQ08623 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PUDPQ08623 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PUDPQ08623 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.68□□□□□ -0.22
PUDPQ08623 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.68□□□□□ -0.22
PUDPQ08623 C1QBPP1-201ENST00000400117 770 ntBASIC13.68□□□□□ -0.22
PUDPQ08623 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.68□□□□□ -0.22
PUDPQ08623 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.68□□□□□ -0.22
PUDPQ08623 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.68□□□□□ -0.22
PUDPQ08623 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PUDPQ08623 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.68□□□□□ -0.22
PUDPQ08623 AC092552.1-201ENST00000547243 906 ntBASIC13.68□□□□□ -0.22
PUDPQ08623 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.68□□□□□ -0.22
PUDPQ08623 LINC02560-201ENST00000596379 459 ntBASIC13.68□□□□□ -0.22
PUDPQ08623 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.68□□□□□ -0.22
PUDPQ08623 MIR8072-201ENST00000614241 80 ntBASIC13.68□□□□□ -0.22
PUDPQ08623 BX539320.1-201ENST00000623759 877 ntBASIC13.68□□□□□ -0.22
PUDPQ08623 AC008761.3-201ENST00000624803 892 ntBASIC13.68□□□□□ -0.22
PUDPQ08623 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PUDPQ08623 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms