Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.33□□□□□ -0.44
SRPXP78539 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.33□□□□□ -0.44
SRPXP78539 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.33□□□□□ -0.44
SRPXP78539 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.33□□□□□ -0.44
SRPXP78539 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.33□□□□□ -0.44
SRPXP78539 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.33□□□□□ -0.44
SRPXP78539 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SRPXP78539 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.33□□□□□ -0.44
SRPXP78539 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.33□□□□□ -0.44
SRPXP78539 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.33□□□□□ -0.44
SRPXP78539 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.33□□□□□ -0.44
SRPXP78539 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.33□□□□□ -0.44
SRPXP78539 AC140113.2-201ENST00000604370 208 ntBASIC12.33□□□□□ -0.44
SRPXP78539 AL589739.1-201ENST00000607720 493 ntBASIC12.33□□□□□ -0.44
SRPXP78539 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 C20orf181-201ENST00000623918 480 ntBASIC12.33□□□□□ -0.44
SRPXP78539 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SRPXP78539 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SRPXP78539 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 AL137783.1-201ENST00000623494 1896 ntBASIC12.33□□□□□ -0.44
SRPXP78539 AL591122.2-201ENST00000624125 1853 ntBASIC12.33□□□□□ -0.44
SRPXP78539 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SRPXP78539 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.33□□□□□ -0.44
SRPXP78539 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SRPXP78539 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SRPXP78539 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SRPXP78539 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.32□□□□□ -0.44
SRPXP78539 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.32□□□□□ -0.44
SRPXP78539 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SRPXP78539 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SRPXP78539 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 AL157414.3-201ENST00000624276 1954 ntBASIC12.32□□□□□ -0.44
SRPXP78539 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.32□□□□□ -0.44
SRPXP78539 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SRPXP78539 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SRPXP78539 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SRPXP78539 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.32□□□□□ -0.44
SRPXP78539 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.32□□□□□ -0.44
SRPXP78539 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
SRPXP78539 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.32□□□□□ -0.44
SRPXP78539 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SRPXP78539 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SRPXP78539 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.32□□□□□ -0.44
SRPXP78539 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SRPXP78539 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms