Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CX3CL1P78423 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.08□□□□□ -0.48
CX3CL1P78423 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 AC136759.1-202ENST00000530858 2194 ntBASIC12.08□□□□□ -0.48
CX3CL1P78423 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.08□□□□□ -0.48
CX3CL1P78423 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.08□□□□□ -0.48
CX3CL1P78423 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CX3CL1P78423 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.08□□□□□ -0.48
CX3CL1P78423 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.08□□□□□ -0.48
CX3CL1P78423 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CX3CL1P78423 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 AL139094.1-201ENST00000405549 1188 ntBASIC12.08□□□□□ -0.48
CX3CL1P78423 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.08□□□□□ -0.48
CX3CL1P78423 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.08□□□□□ -0.48
CX3CL1P78423 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.08□□□□□ -0.48
CX3CL1P78423 HLA-K-203ENST00000430151 1046 ntBASIC12.08□□□□□ -0.48
CX3CL1P78423 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.08□□□□□ -0.48
CX3CL1P78423 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.08□□□□□ -0.48
CX3CL1P78423 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.08□□□□□ -0.48
CX3CL1P78423 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.08□□□□□ -0.48
CX3CL1P78423 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.08□□□□□ -0.48
CX3CL1P78423 AC009486.1-201ENST00000569860 813 ntBASIC12.08□□□□□ -0.48
CX3CL1P78423 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.08□□□□□ -0.48
CX3CL1P78423 CLUHP6-201ENST00000580789 941 ntBASIC12.08□□□□□ -0.48
CX3CL1P78423 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 AP005019.2-201ENST00000615104 511 ntBASIC12.08□□□□□ -0.48
CX3CL1P78423 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.08□□□□□ -0.48
CX3CL1P78423 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.08□□□□□ -0.48
CX3CL1P78423 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.08□□□□□ -0.48
CX3CL1P78423 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.08□□□□□ -0.48
CX3CL1P78423 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.08□□□□□ -0.48
CX3CL1P78423 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CX3CL1P78423 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.08□□□□□ -0.48
CX3CL1P78423 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CX3CL1P78423 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
CX3CL1P78423 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CX3CL1P78423 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CX3CL1P78423 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.07□□□□□ -0.48
CX3CL1P78423 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CX3CL1P78423 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CX3CL1P78423 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 AC126335.2-201ENST00000623362 4637 ntBASIC12.07□□□□□ -0.48
CX3CL1P78423 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CX3CL1P78423 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.07□□□□□ -0.48
CX3CL1P78423 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.07□□□□□ -0.48
CX3CL1P78423 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.07□□□□□ -0.48
CX3CL1P78423 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CX3CL1P78423 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.07□□□□□ -0.48
CX3CL1P78423 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.07□□□□□ -0.48
CX3CL1P78423 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 RN7SL752P-201ENST00000463779 287 ntBASIC12.07□□□□□ -0.48
CX3CL1P78423 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 AC011495.1-201ENST00000498085 584 ntBASIC12.07□□□□□ -0.48
CX3CL1P78423 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.07□□□□□ -0.48
CX3CL1P78423 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CX3CL1P78423 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CX3CL1P78423 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.07□□□□□ -0.48
CX3CL1P78423 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CX3CL1P78423 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CX3CL1P78423 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CX3CL1P78423 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.07□□□□□ -0.48
CX3CL1P78423 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.07□□□□□ -0.48
CX3CL1P78423 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms