Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC139749.1-202ENST00000617529 3139 ntBASIC17.41■□□□□ 0.38
IRX3P78415 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.41■□□□□ 0.38
IRX3P78415 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.41■□□□□ 0.38
IRX3P78415 AC009090.5-201ENST00000624886 2285 ntBASIC17.41■□□□□ 0.38
IRX3P78415 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.41■□□□□ 0.38
IRX3P78415 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.41■□□□□ 0.38
IRX3P78415 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
IRX3P78415 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.41■□□□□ 0.38
IRX3P78415 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
IRX3P78415 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.41■□□□□ 0.38
IRX3P78415 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.41■□□□□ 0.38
IRX3P78415 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
IRX3P78415 FTLP1-201ENST00000449155 526 ntBASIC17.41■□□□□ 0.38
IRX3P78415 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.41■□□□□ 0.38
IRX3P78415 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.41■□□□□ 0.38
IRX3P78415 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.41■□□□□ 0.38
IRX3P78415 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
IRX3P78415 AL161670.2-201ENST00000557650 1227 ntBASIC17.41■□□□□ 0.38
IRX3P78415 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IRX3P78415 MIR4722-201ENST00000578292 60 ntBASIC17.41■□□□□ 0.38
IRX3P78415 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.41■□□□□ 0.38
IRX3P78415 MIR6727-201ENST00000620702 65 ntBASIC17.41■□□□□ 0.38
IRX3P78415 AC079336.7-201ENST00000623428 1078 ntBASIC17.41■□□□□ 0.38
IRX3P78415 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.41■□□□□ 0.38
IRX3P78415 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IRX3P78415 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IRX3P78415 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IRX3P78415 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC17.41■□□□□ 0.38
IRX3P78415 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IRX3P78415 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
IRX3P78415 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IRX3P78415 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.41■□□□□ 0.38
IRX3P78415 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
IRX3P78415 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IRX3P78415 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IRX3P78415 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IRX3P78415 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
IRX3P78415 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.4■□□□□ 0.38
IRX3P78415 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.4■□□□□ 0.38
IRX3P78415 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
IRX3P78415 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.4■□□□□ 0.38
IRX3P78415 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.4■□□□□ 0.38
IRX3P78415 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.4■□□□□ 0.38
IRX3P78415 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.4■□□□□ 0.38
IRX3P78415 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
IRX3P78415 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.4■□□□□ 0.38
IRX3P78415 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
IRX3P78415 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.4■□□□□ 0.38
IRX3P78415 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.4■□□□□ 0.38
IRX3P78415 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 RPS2P36-201ENST00000456516 831 ntBASIC17.4■□□□□ 0.38
IRX3P78415 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.4■□□□□ 0.38
IRX3P78415 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.4■□□□□ 0.38
IRX3P78415 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.4■□□□□ 0.38
IRX3P78415 MARK2P5-201ENST00000507649 634 ntBASIC17.4■□□□□ 0.38
IRX3P78415 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.4■□□□□ 0.38
IRX3P78415 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.4■□□□□ 0.38
IRX3P78415 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.4■□□□□ 0.38
IRX3P78415 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.4■□□□□ 0.38
IRX3P78415 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.4■□□□□ 0.38
IRX3P78415 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
IRX3P78415 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.4■□□□□ 0.38
IRX3P78415 AC090164.2-201ENST00000611487 516 ntBASIC17.4■□□□□ 0.38
IRX3P78415 AC128714.1-201ENST00000637035 887 ntBASIC17.4■□□□□ 0.38
IRX3P78415 AC068587.8-201ENST00000641239 219 ntBASIC17.4■□□□□ 0.38
IRX3P78415 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.4■□□□□ 0.38
IRX3P78415 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.4■□□□□ 0.38
IRX3P78415 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.4■□□□□ 0.38
IRX3P78415 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.4■□□□□ 0.38
IRX3P78415 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IRX3P78415 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.4■□□□□ 0.38
IRX3P78415 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
IRX3P78415 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IRX3P78415 AC106881.1-201ENST00000605849 3329 ntBASIC17.39■□□□□ 0.38
IRX3P78415 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.39■□□□□ 0.37
IRX3P78415 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC17.39■□□□□ 0.37
IRX3P78415 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IRX3P78415 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms