Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN6P56747 AP005117.1-202ENST00000581724 1908 ntBASIC14.28□□□□□ -0.12
CLDN6P56747 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN6P56747 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN6P56747 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN6P56747 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN6P56747 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 Z98259.2-201ENST00000641583 609 ntBASIC14.28□□□□□ -0.12
CLDN6P56747 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN6P56747 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN6P56747 AC092850.2-201ENST00000623821 2697 ntBASIC14.28□□□□□ -0.12
CLDN6P56747 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN6P56747 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN6P56747 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN6P56747 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN6P56747 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN6P56747 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN6P56747 REXO1L4P-201ENST00000605109 1937 ntBASIC14.27□□□□□ -0.12
CLDN6P56747 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN6P56747 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN6P56747 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN6P56747 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN6P56747 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CLDN6P56747 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN6P56747 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN6P56747 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN6P56747 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN6P56747 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.27□□□□□ -0.13
CLDN6P56747 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN6P56747 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN6P56747 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN6P56747 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN6P56747 CTBP2P4-201ENST00000513884 920 ntBASIC14.27□□□□□ -0.13
CLDN6P56747 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN6P56747 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN6P56747 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN6P56747 AC026803.1-201ENST00000569130 274 ntBASIC14.27□□□□□ -0.13
CLDN6P56747 AC103810.10-201ENST00000606504 343 ntBASIC14.27□□□□□ -0.13
CLDN6P56747 AL157813.1-201ENST00000612996 587 ntBASIC14.27□□□□□ -0.13
CLDN6P56747 AC051619.9-201ENST00000623237 597 ntBASIC14.27□□□□□ -0.13
CLDN6P56747 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN6P56747 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
CLDN6P56747 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CLDN6P56747 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CLDN6P56747 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN6P56747 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN6P56747 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN6P56747 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN6P56747 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN6P56747 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN6P56747 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CLDN6P56747 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLDN6P56747 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CLDN6P56747 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLDN6P56747 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN6P56747 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 AC239868.1-201ENST00000369385 493 ntBASIC14.26□□□□□ -0.13
CLDN6P56747 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 AP002803.1-201ENST00000528836 498 ntBASIC14.26□□□□□ -0.13
CLDN6P56747 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN6P56747 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLDN6P56747 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN6P56747 MIR3677-201ENST00000578964 60 ntBASIC14.26□□□□□ -0.13
CLDN6P56747 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN6P56747 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.26□□□□□ -0.13
CLDN6P56747 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN6P56747 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CLDN6P56747 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN6P56747 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN6P56747 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms