Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.39■□□□□ 0.53
AFDNP55196 C2orf69P1-201ENST00000563532 1093 ntBASIC18.39■□□□□ 0.53
AFDNP55196 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
AFDNP55196 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AFDNP55196 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AFDNP55196 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.38■□□□□ 0.53
AFDNP55196 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.38■□□□□ 0.53
AFDNP55196 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.38■□□□□ 0.53
AFDNP55196 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.38■□□□□ 0.53
AFDNP55196 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
AFDNP55196 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC18.38■□□□□ 0.53
AFDNP55196 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.38■□□□□ 0.53
AFDNP55196 CR383656.3-201ENST00000551315 183 ntBASIC18.38■□□□□ 0.53
AFDNP55196 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.38■□□□□ 0.53
AFDNP55196 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC18.38■□□□□ 0.53
AFDNP55196 NUDT4P2-201ENST00000578341 546 ntBASIC18.38■□□□□ 0.53
AFDNP55196 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
AFDNP55196 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.38■□□□□ 0.53
AFDNP55196 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.38■□□□□ 0.53
AFDNP55196 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
AFDNP55196 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.38■□□□□ 0.53
AFDNP55196 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AFDNP55196 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.38■□□□□ 0.53
AFDNP55196 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.38■□□□□ 0.53
AFDNP55196 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
AFDNP55196 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.37■□□□□ 0.53
AFDNP55196 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.37■□□□□ 0.53
AFDNP55196 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.37■□□□□ 0.53
AFDNP55196 AC114947.1-202ENST00000514136 344 ntBASIC18.37■□□□□ 0.53
AFDNP55196 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.37■□□□□ 0.53
AFDNP55196 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.37■□□□□ 0.53
AFDNP55196 MIR3180-2-201ENST00000581748 88 ntBASIC18.37■□□□□ 0.53
AFDNP55196 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AFDNP55196 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.37■□□□□ 0.53
AFDNP55196 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.37■□□□□ 0.53
AFDNP55196 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
AFDNP55196 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.37■□□□□ 0.53
AFDNP55196 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
AFDNP55196 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
AFDNP55196 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.37■□□□□ 0.53
AFDNP55196 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.37■□□□□ 0.53
AFDNP55196 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
AFDNP55196 AC010234.1-201ENST00000494599 870 ntBASIC18.37■□□□□ 0.53
AFDNP55196 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.37■□□□□ 0.53
AFDNP55196 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC18.37■□□□□ 0.53
AFDNP55196 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC18.37■□□□□ 0.53
AFDNP55196 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.37■□□□□ 0.53
AFDNP55196 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.37■□□□□ 0.53
AFDNP55196 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.37■□□□□ 0.53
AFDNP55196 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
AFDNP55196 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.37■□□□□ 0.53
AFDNP55196 LINC01815-202ENST00000641468 1409 ntBASIC18.37■□□□□ 0.53
AFDNP55196 AC009093.10-201ENST00000641956 1442 ntBASIC18.37■□□□□ 0.53
AFDNP55196 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AFDNP55196 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
AFDNP55196 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AFDNP55196 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AFDNP55196 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
AFDNP55196 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
AFDNP55196 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
AFDNP55196 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
AFDNP55196 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.36■□□□□ 0.53
AFDNP55196 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.36■□□□□ 0.53
AFDNP55196 AL512306.1-201ENST00000432698 848 ntBASIC18.36■□□□□ 0.53
AFDNP55196 AC092580.1-201ENST00000433998 658 ntBASIC18.36■□□□□ 0.53
AFDNP55196 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.36■□□□□ 0.53
AFDNP55196 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.36■□□□□ 0.53
AFDNP55196 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms