Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.83■□□□□ 0.12
CACNA2D1P54289 AC003102.2-201ENST00000589195 1469 ntBASIC15.83■□□□□ 0.12
CACNA2D1P54289 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.83■□□□□ 0.12
CACNA2D1P54289 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.83■□□□□ 0.12
CACNA2D1P54289 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.83■□□□□ 0.12
CACNA2D1P54289 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CACNA2D1P54289 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CACNA2D1P54289 AJ011931.1-201ENST00000618749 2492 ntBASIC15.83■□□□□ 0.12
CACNA2D1P54289 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CACNA2D1P54289 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CACNA2D1P54289 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.83■□□□□ 0.12
CACNA2D1P54289 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 BRWD1P1-201ENST00000401091 371 ntBASIC15.82■□□□□ 0.12
CACNA2D1P54289 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 AC007969.1-201ENST00000433675 447 ntBASIC15.82■□□□□ 0.12
CACNA2D1P54289 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 Z93015.1-201ENST00000451718 390 ntBASIC15.82■□□□□ 0.12
CACNA2D1P54289 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 RN7SL219P-201ENST00000582872 296 ntBASIC15.82■□□□□ 0.12
CACNA2D1P54289 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CACNA2D1P54289 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
CACNA2D1P54289 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 AC005695.3-201ENST00000614522 232 ntBASIC15.81■□□□□ 0.12
CACNA2D1P54289 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 AL096828.3-201ENST00000615354 462 ntBASIC15.81■□□□□ 0.12
CACNA2D1P54289 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CACNA2D1P54289 MIR6869-201ENST00000619434 62 ntBASIC15.81■□□□□ 0.12
CACNA2D1P54289 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.81■□□□□ 0.12
CACNA2D1P54289 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.81■□□□□ 0.12
CACNA2D1P54289 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms