Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.35■□□□□ 0.05
ATXN3P54252 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ATXN3P54252 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ATXN3P54252 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.35■□□□□ 0.05
ATXN3P54252 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.35■□□□□ 0.05
ATXN3P54252 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.35■□□□□ 0.05
ATXN3P54252 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
ATXN3P54252 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
ATXN3P54252 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 REXO1L1P-202ENST00000608646 1974 ntBASIC15.35■□□□□ 0.05
ATXN3P54252 AC005840.4-201ENST00000541242 2494 ntBASIC15.35■□□□□ 0.05
ATXN3P54252 AC007191.1-201ENST00000623179 2995 ntBASIC15.35■□□□□ 0.05
ATXN3P54252 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
ATXN3P54252 AC079781.5-202ENST00000641784 3743 ntBASIC15.35■□□□□ 0.05
ATXN3P54252 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 AC006001.1-201ENST00000325130 474 ntBASIC15.35■□□□□ 0.05
ATXN3P54252 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ATXN3P54252 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
ATXN3P54252 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ATXN3P54252 AL662890.1-201ENST00000396818 632 ntBASIC15.35■□□□□ 0.05
ATXN3P54252 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.35■□□□□ 0.05
ATXN3P54252 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.35■□□□□ 0.05
ATXN3P54252 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.35■□□□□ 0.05
ATXN3P54252 AC026410.3-201ENST00000514280 936 ntBASIC15.35■□□□□ 0.05
ATXN3P54252 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ATXN3P54252 AC078819.1-201ENST00000547454 765 ntBASIC15.35■□□□□ 0.05
ATXN3P54252 AC012085.1-201ENST00000548270 765 ntBASIC15.35■□□□□ 0.05
ATXN3P54252 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
ATXN3P54252 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.35■□□□□ 0.05
ATXN3P54252 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.35■□□□□ 0.05
ATXN3P54252 AC104982.3-201ENST00000581995 514 ntBASIC15.35■□□□□ 0.05
ATXN3P54252 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.35■□□□□ 0.05
ATXN3P54252 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.35■□□□□ 0.05
ATXN3P54252 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.35■□□□□ 0.05
ATXN3P54252 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.35■□□□□ 0.05
ATXN3P54252 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
ATXN3P54252 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ATXN3P54252 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ATXN3P54252 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.35■□□□□ 0.05
ATXN3P54252 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
ATXN3P54252 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ATXN3P54252 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.34■□□□□ 0.05
ATXN3P54252 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
ATXN3P54252 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.34■□□□□ 0.05
ATXN3P54252 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.34■□□□□ 0.05
ATXN3P54252 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 AC138028.6-201ENST00000616106 1482 ntBASIC15.34■□□□□ 0.05
ATXN3P54252 AGAP7P-201ENST00000582299 2062 ntBASIC15.34■□□□□ 0.05
ATXN3P54252 AGAP14-201ENST00000624701 2060 ntBASIC15.34■□□□□ 0.05
ATXN3P54252 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.34■□□□□ 0.05
ATXN3P54252 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.34■□□□□ 0.05
ATXN3P54252 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.34■□□□□ 0.05
ATXN3P54252 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.34■□□□□ 0.05
ATXN3P54252 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.34■□□□□ 0.05
ATXN3P54252 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.34■□□□□ 0.05
ATXN3P54252 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
ATXN3P54252 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ATXN3P54252 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.34■□□□□ 0.05
ATXN3P54252 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATXN3P54252 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms