Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MRE11P49959 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC17.49■□□□□ 0.39
MRE11P49959 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MRE11P49959 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC17.49■□□□□ 0.39
MRE11P49959 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.49■□□□□ 0.39
MRE11P49959 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
MRE11P49959 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.49■□□□□ 0.39
MRE11P49959 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
MRE11P49959 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MRE11P49959 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC17.49■□□□□ 0.39
MRE11P49959 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC17.49■□□□□ 0.39
MRE11P49959 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 CES1P1-201ENST00000421606 1704 ntBASIC17.49■□□□□ 0.39
MRE11P49959 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.49■□□□□ 0.39
MRE11P49959 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC17.49■□□□□ 0.39
MRE11P49959 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MRE11P49959 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.49■□□□□ 0.39
MRE11P49959 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MRE11P49959 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
MRE11P49959 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MRE11P49959 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.49■□□□□ 0.39
MRE11P49959 FAM90A12P-201ENST00000519497 2375 ntBASIC17.48■□□□□ 0.39
MRE11P49959 FAM90A24P-201ENST00000520792 2369 ntBASIC17.48■□□□□ 0.39
MRE11P49959 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.48■□□□□ 0.39
MRE11P49959 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.48■□□□□ 0.39
MRE11P49959 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
MRE11P49959 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
MRE11P49959 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MRE11P49959 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC17.48■□□□□ 0.39
MRE11P49959 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MRE11P49959 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.48■□□□□ 0.39
MRE11P49959 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.48■□□□□ 0.39
MRE11P49959 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MRE11P49959 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.48■□□□□ 0.39
MRE11P49959 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.48■□□□□ 0.39
MRE11P49959 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.48■□□□□ 0.39
MRE11P49959 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.48■□□□□ 0.39
MRE11P49959 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC17.48■□□□□ 0.39
MRE11P49959 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
MRE11P49959 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MRE11P49959 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MRE11P49959 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC17.48■□□□□ 0.39
MRE11P49959 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.48■□□□□ 0.39
MRE11P49959 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRE11P49959 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
MRE11P49959 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
MRE11P49959 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MRE11P49959 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRE11P49959 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRE11P49959 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MRE11P49959 AL023775.1-201ENST00000454907 1746 ntBASIC17.47■□□□□ 0.39
MRE11P49959 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MRE11P49959 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRE11P49959 AC090505.1-201ENST00000430515 1834 ntBASIC17.47■□□□□ 0.39
MRE11P49959 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MRE11P49959 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRE11P49959 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRE11P49959 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MRE11P49959 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
MRE11P49959 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC17.47■□□□□ 0.39
MRE11P49959 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC17.47■□□□□ 0.39
MRE11P49959 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC17.47■□□□□ 0.39
MRE11P49959 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.47■□□□□ 0.39
MRE11P49959 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MRE11P49959 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MRE11P49959 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.47■□□□□ 0.39
MRE11P49959 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.47■□□□□ 0.39
MRE11P49959 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.47■□□□□ 0.39
MRE11P49959 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MRE11P49959 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.47■□□□□ 0.39
MRE11P49959 AC022447.6-201ENST00000515522 438 ntBASIC17.47■□□□□ 0.39
MRE11P49959 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.47■□□□□ 0.39
MRE11P49959 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.47■□□□□ 0.39
MRE11P49959 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.47■□□□□ 0.39
MRE11P49959 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MRE11P49959 AL158211.3-201ENST00000607385 239 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms