Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CENPFP49454 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CENPFP49454 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CENPFP49454 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CENPFP49454 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.33■□□□□ 0.2
CENPFP49454 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.33■□□□□ 0.2
CENPFP49454 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.33■□□□□ 0.2
CENPFP49454 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CENPFP49454 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CENPFP49454 KRT8P28-201ENST00000433288 1390 ntBASIC16.33■□□□□ 0.2
CENPFP49454 WASH3P-207ENST00000560956 1394 ntBASIC16.33■□□□□ 0.2
CENPFP49454 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.33■□□□□ 0.2
CENPFP49454 CCL25-202ENST00000315626 450 ntTSL 2 BASIC16.33■□□□□ 0.2
CENPFP49454 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CENPFP49454 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.33■□□□□ 0.2
CENPFP49454 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC16.33■□□□□ 0.2
CENPFP49454 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CENPFP49454 AL160191.2-201ENST00000603975 601 ntBASIC16.33■□□□□ 0.2
CENPFP49454 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.33■□□□□ 0.2
CENPFP49454 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.33■□□□□ 0.2
CENPFP49454 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CENPFP49454 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CENPFP49454 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CENPFP49454 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CENPFP49454 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CENPFP49454 AGGF1P1-201ENST00000509500 2073 ntBASIC16.32■□□□□ 0.2
CENPFP49454 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CENPFP49454 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.32■□□□□ 0.2
CENPFP49454 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 ERP29P1-201ENST00000442902 706 ntBASIC16.32■□□□□ 0.2
CENPFP49454 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.32■□□□□ 0.2
CENPFP49454 DOC2GP-204ENST00000639052 2548 ntBASIC16.32■□□□□ 0.2
CENPFP49454 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.32■□□□□ 0.2
CENPFP49454 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CENPFP49454 NHP2P1-201ENST00000335274 462 ntBASIC16.32■□□□□ 0.2
CENPFP49454 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC16.32■□□□□ 0.2
CENPFP49454 AC092570.1-201ENST00000414446 469 ntBASIC16.32■□□□□ 0.2
CENPFP49454 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.32■□□□□ 0.2
CENPFP49454 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.32■□□□□ 0.2
CENPFP49454 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.32■□□□□ 0.2
CENPFP49454 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.32■□□□□ 0.2
CENPFP49454 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CENPFP49454 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.32■□□□□ 0.2
CENPFP49454 RNA5SP406-201ENST00000516106 112 ntBASIC16.32■□□□□ 0.2
CENPFP49454 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC16.32■□□□□ 0.2
CENPFP49454 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC16.32■□□□□ 0.2
CENPFP49454 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CENPFP49454 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CENPFP49454 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 FUCA1P1-201ENST00000374476 1351 ntBASIC16.31■□□□□ 0.2
CENPFP49454 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CENPFP49454 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 FAU-201ENST00000279259 461 ntTSL 2 BASIC16.31■□□□□ 0.2
CENPFP49454 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.31■□□□□ 0.2
CENPFP49454 RN7SL564P-201ENST00000496309 250 ntBASIC16.31■□□□□ 0.2
CENPFP49454 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CENPFP49454 BCRP4-201ENST00000506079 804 ntBASIC16.31■□□□□ 0.2
CENPFP49454 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.31■□□□□ 0.2
CENPFP49454 AC006116.2-201ENST00000589958 988 ntBASIC16.31■□□□□ 0.2
CENPFP49454 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 AC004466.2-201ENST00000614749 516 ntBASIC16.31■□□□□ 0.2
CENPFP49454 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.31■□□□□ 0.2
CENPFP49454 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CENPFP49454 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.31■□□□□ 0.2
CENPFP49454 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC16.31■□□□□ 0.2
CENPFP49454 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC16.31■□□□□ 0.2
CENPFP49454 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC16.31■□□□□ 0.2
CENPFP49454 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.31■□□□□ 0.2
CENPFP49454 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.31■□□□□ 0.2
CENPFP49454 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CENPFP49454 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.31■□□□□ 0.2
CENPFP49454 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CENPFP49454 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.3■□□□□ 0.2
CENPFP49454 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms