Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LHX1P48742 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LHX1P48742 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LHX1P48742 AC004899.1-201ENST00000424687 1714 ntBASIC15.71■□□□□ 0.1
LHX1P48742 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.71■□□□□ 0.1
LHX1P48742 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.71■□□□□ 0.1
LHX1P48742 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LHX1P48742 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LHX1P48742 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LHX1P48742 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LHX1P48742 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LHX1P48742 AL590440.2-201ENST00000641973 1595 ntBASIC15.7■□□□□ 0.1
LHX1P48742 AL008718.2-201ENST00000609206 1313 ntBASIC15.7■□□□□ 0.1
LHX1P48742 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.7■□□□□ 0.1
LHX1P48742 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LHX1P48742 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX1P48742 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.7■□□□□ 0.1
LHX1P48742 AC139712.1-201ENST00000378256 1875 ntBASIC15.7■□□□□ 0.1
LHX1P48742 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX1P48742 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX1P48742 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
LHX1P48742 DPM3-202ENST00000368399 517 ntBASIC15.7■□□□□ 0.1
LHX1P48742 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX1P48742 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX1P48742 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.7■□□□□ 0.1
LHX1P48742 AC022494.1-201ENST00000466044 728 ntBASIC15.7■□□□□ 0.1
LHX1P48742 AC106794.1-201ENST00000506935 792 ntBASIC15.7■□□□□ 0.1
LHX1P48742 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
LHX1P48742 AC103988.2-201ENST00000561804 725 ntBASIC15.7■□□□□ 0.1
LHX1P48742 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.7■□□□□ 0.1
LHX1P48742 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 AP000346.4-201ENST00000614827 381 ntBASIC15.7■□□□□ 0.1
LHX1P48742 AL136295.7-201ENST00000619226 1200 ntBASIC15.7■□□□□ 0.1
LHX1P48742 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
LHX1P48742 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.7■□□□□ 0.1
LHX1P48742 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LHX1P48742 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 AC138028.6-201ENST00000616106 1482 ntBASIC15.7■□□□□ 0.1
LHX1P48742 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LHX1P48742 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LHX1P48742 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.7■□□□□ 0.1
LHX1P48742 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.69■□□□□ 0.1
LHX1P48742 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
LHX1P48742 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.69■□□□□ 0.1
LHX1P48742 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
LHX1P48742 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LHX1P48742 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
LHX1P48742 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.69■□□□□ 0.1
LHX1P48742 NKAIN1P1-201ENST00000435754 582 ntBASIC15.69■□□□□ 0.1
LHX1P48742 AL157407.1-201ENST00000435784 904 ntBASIC15.69■□□□□ 0.1
LHX1P48742 AKR7A2P1-201ENST00000460134 915 ntBASIC15.69■□□□□ 0.1
LHX1P48742 SCARNA20.5-201ENST00000516991 142 ntBASIC15.69■□□□□ 0.1
LHX1P48742 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.69■□□□□ 0.1
LHX1P48742 AC044849.1-201ENST00000519737 1188 ntBASIC15.69■□□□□ 0.1
LHX1P48742 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.69■□□□□ 0.1
LHX1P48742 AL451050.2-201ENST00000606967 682 ntBASIC15.69■□□□□ 0.1
LHX1P48742 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.69■□□□□ 0.1
LHX1P48742 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LHX1P48742 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms