Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.71□□□□□ -0.21
RFC3P40938 MIR4683-201ENST00000579659 81 ntBASIC13.71□□□□□ -0.21
RFC3P40938 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.71□□□□□ -0.21
RFC3P40938 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
RFC3P40938 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.71□□□□□ -0.21
RFC3P40938 AC012508.2-201ENST00000567613 1472 ntBASIC13.71□□□□□ -0.21
RFC3P40938 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 INE2-201ENST00000630399 1874 ntBASIC13.71□□□□□ -0.21
RFC3P40938 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
RFC3P40938 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
RFC3P40938 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFC3P40938 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.71□□□□□ -0.22
RFC3P40938 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RFC3P40938 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RFC3P40938 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RFC3P40938 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.71□□□□□ -0.22
RFC3P40938 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.71□□□□□ -0.22
RFC3P40938 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.7□□□□□ -0.22
RFC3P40938 AC018735.1-201ENST00000437208 1502 ntBASIC13.7□□□□□ -0.22
RFC3P40938 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.7□□□□□ -0.22
RFC3P40938 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.7□□□□□ -0.22
RFC3P40938 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.7□□□□□ -0.22
RFC3P40938 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.7□□□□□ -0.22
RFC3P40938 REXO1L2P-201ENST00000425429 2069 ntBASIC13.7□□□□□ -0.22
RFC3P40938 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
RFC3P40938 AC015656.1-201ENST00000624209 3578 ntBASIC13.7□□□□□ -0.22
RFC3P40938 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 AC020910.5-201ENST00000623668 1865 ntBASIC13.7□□□□□ -0.22
RFC3P40938 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
RFC3P40938 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RFC3P40938 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.7□□□□□ -0.22
RFC3P40938 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.7□□□□□ -0.22
RFC3P40938 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.7□□□□□ -0.22
RFC3P40938 FTLP10-202ENST00000505798 471 ntBASIC13.7□□□□□ -0.22
RFC3P40938 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RFC3P40938 DUX4L47-201ENST00000566374 394 ntBASIC13.7□□□□□ -0.22
RFC3P40938 AC103810.3-201ENST00000583567 96 ntBASIC13.7□□□□□ -0.22
RFC3P40938 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
RFC3P40938 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.7□□□□□ -0.22
RFC3P40938 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RFC3P40938 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RFC3P40938 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFC3P40938 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.69□□□□□ -0.22
RFC3P40938 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.69□□□□□ -0.22
RFC3P40938 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RFC3P40938 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.69□□□□□ -0.22
RFC3P40938 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RFC3P40938 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.69□□□□□ -0.22
RFC3P40938 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.69□□□□□ -0.22
RFC3P40938 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RFC3P40938 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.69□□□□□ -0.22
RFC3P40938 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.69□□□□□ -0.22
RFC3P40938 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.69□□□□□ -0.22
RFC3P40938 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.69□□□□□ -0.22
RFC3P40938 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RFC3P40938 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 AP001002.3-201ENST00000623482 206 ntBASIC13.69□□□□□ -0.22
RFC3P40938 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.69□□□□□ -0.22
RFC3P40938 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RFC3P40938 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.69□□□□□ -0.22
RFC3P40938 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RFC3P40938 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFC3P40938 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RFC3P40938 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.69□□□□□ -0.22
RFC3P40938 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.69□□□□□ -0.22
RFC3P40938 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms