Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 INE1-201ENST00000456273 945 ntBASIC14.17□□□□□ -0.14
PTPN6P29350 AC026434.2-201ENST00000506094 1078 ntBASIC14.17□□□□□ -0.14
PTPN6P29350 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.17□□□□□ -0.14
PTPN6P29350 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
PTPN6P29350 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
PTPN6P29350 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.17□□□□□ -0.14
PTPN6P29350 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PTPN6P29350 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 AC239800.4-201ENST00000603712 296 ntBASIC14.17□□□□□ -0.14
PTPN6P29350 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PTPN6P29350 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PTPN6P29350 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 AC010327.5-201ENST00000586923 3061 ntBASIC14.17□□□□□ -0.14
PTPN6P29350 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PTPN6P29350 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.17□□□□□ -0.14
PTPN6P29350 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PTPN6P29350 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.17□□□□□ -0.14
PTPN6P29350 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PTPN6P29350 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.17□□□□□ -0.14
PTPN6P29350 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 AC012617.1-204ENST00000586340 2305 ntBASIC14.16□□□□□ -0.14
PTPN6P29350 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PTPN6P29350 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PTPN6P29350 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PTPN6P29350 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.16□□□□□ -0.14
PTPN6P29350 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.16□□□□□ -0.14
PTPN6P29350 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 INTS4P2-202ENST00000614726 2019 ntBASIC14.16□□□□□ -0.14
PTPN6P29350 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PTPN6P29350 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PTPN6P29350 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
PTPN6P29350 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 AC134915.1-201ENST00000426461 574 ntBASIC14.16□□□□□ -0.14
PTPN6P29350 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 KRT17P7-201ENST00000451704 1104 ntBASIC14.16□□□□□ -0.14
PTPN6P29350 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.16□□□□□ -0.14
PTPN6P29350 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.16□□□□□ -0.14
PTPN6P29350 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.16□□□□□ -0.14
PTPN6P29350 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 AL359711.2-201ENST00000563105 872 ntBASIC14.16□□□□□ -0.14
PTPN6P29350 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.16□□□□□ -0.14
PTPN6P29350 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.16□□□□□ -0.14
PTPN6P29350 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.16□□□□□ -0.14
PTPN6P29350 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PTPN6P29350 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PTPN6P29350 AL033527.5-201ENST00000641382 801 ntBASIC14.16□□□□□ -0.14
PTPN6P29350 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PTPN6P29350 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.16□□□□□ -0.14
PTPN6P29350 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PTPN6P29350 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms