Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.75□□□□□ -0.21
ABCD3P28288 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.75□□□□□ -0.21
ABCD3P28288 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.75□□□□□ -0.21
ABCD3P28288 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.75□□□□□ -0.21
ABCD3P28288 AL136309.1-201ENST00000403917 691 ntBASIC13.75□□□□□ -0.21
ABCD3P28288 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.75□□□□□ -0.21
ABCD3P28288 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.75□□□□□ -0.21
ABCD3P28288 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.75□□□□□ -0.21
ABCD3P28288 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 HOMER2P2-201ENST00000451621 847 ntBASIC13.75□□□□□ -0.21
ABCD3P28288 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 RNA5SP412-201ENST00000516234 123 ntBASIC13.75□□□□□ -0.21
ABCD3P28288 AC131206.1-201ENST00000538078 1211 ntBASIC13.75□□□□□ -0.21
ABCD3P28288 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 PPY2P-201ENST00000582808 702 ntBASIC13.75□□□□□ -0.21
ABCD3P28288 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.75□□□□□ -0.21
ABCD3P28288 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ABCD3P28288 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ABCD3P28288 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ABCD3P28288 MTHFR-210ENST00000641407 2387 ntBASIC13.75□□□□□ -0.21
ABCD3P28288 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 AL161772.1-201ENST00000610494 4412 ntBASIC13.75□□□□□ -0.21
ABCD3P28288 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.75□□□□□ -0.21
ABCD3P28288 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ABCD3P28288 MYO15B-237ENST00000642007 4893 ntBASIC13.74□□□□□ -0.21
ABCD3P28288 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.74□□□□□ -0.21
ABCD3P28288 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
ABCD3P28288 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ABCD3P28288 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.74□□□□□ -0.21
ABCD3P28288 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.74□□□□□ -0.21
ABCD3P28288 AL355994.2-201ENST00000447882 704 ntBASIC13.74□□□□□ -0.21
ABCD3P28288 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.74□□□□□ -0.21
ABCD3P28288 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
ABCD3P28288 AP006547.1-201ENST00000563435 692 ntBASIC13.74□□□□□ -0.21
ABCD3P28288 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.74□□□□□ -0.21
ABCD3P28288 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.74□□□□□ -0.21
ABCD3P28288 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.74□□□□□ -0.21
ABCD3P28288 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.74□□□□□ -0.21
ABCD3P28288 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ABCD3P28288 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms