Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH3P22223 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CDH3P22223 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH3P22223 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH3P22223 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH3P22223 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH3P22223 AL139094.1-201ENST00000405549 1188 ntBASIC14.72□□□□□ -0.05
CDH3P22223 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH3P22223 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH3P22223 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH3P22223 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH3P22223 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.72□□□□□ -0.05
CDH3P22223 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH3P22223 MIR4259-201ENST00000584466 101 ntBASIC14.72□□□□□ -0.05
CDH3P22223 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.72□□□□□ -0.05
CDH3P22223 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH3P22223 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.72□□□□□ -0.05
CDH3P22223 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
CDH3P22223 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.72□□□□□ -0.05
CDH3P22223 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH3P22223 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
CDH3P22223 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH3P22223 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 AC148477.4-201ENST00000613430 1793 ntBASIC14.71□□□□□ -0.05
CDH3P22223 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH3P22223 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH3P22223 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CDH3P22223 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 RPS2P32-201ENST00000439199 892 ntBASIC14.71□□□□□ -0.05
CDH3P22223 AC007274.1-201ENST00000439805 662 ntBASIC14.71□□□□□ -0.05
CDH3P22223 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH3P22223 AC119751.2-201ENST00000504529 210 ntBASIC14.71□□□□□ -0.05
CDH3P22223 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.71□□□□□ -0.05
CDH3P22223 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.71□□□□□ -0.05
CDH3P22223 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH3P22223 AC025279.2-201ENST00000569730 653 ntBASIC14.71□□□□□ -0.05
CDH3P22223 GNRHR2-203ENST00000581100 1187 ntBASIC14.71□□□□□ -0.05
CDH3P22223 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH3P22223 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH3P22223 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH3P22223 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CDH3P22223 TMBIM7P-203ENST00000641617 1718 ntBASIC14.71□□□□□ -0.05
CDH3P22223 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH3P22223 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH3P22223 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH3P22223 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH3P22223 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CDH3P22223 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH3P22223 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CDH3P22223 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CDH3P22223 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH3P22223 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms