Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.81■□□□□ 0.44
CHGBP05060 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.81■□□□□ 0.44
CHGBP05060 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CHGBP05060 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.81■□□□□ 0.44
CHGBP05060 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.81■□□□□ 0.44
CHGBP05060 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.81■□□□□ 0.44
CHGBP05060 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.81■□□□□ 0.44
CHGBP05060 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.81■□□□□ 0.44
CHGBP05060 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.81■□□□□ 0.44
CHGBP05060 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHGBP05060 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHGBP05060 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHGBP05060 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHGBP05060 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.8■□□□□ 0.44
CHGBP05060 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 AC068418.2-201ENST00000577309 3703 ntBASIC17.8■□□□□ 0.44
CHGBP05060 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.8■□□□□ 0.44
CHGBP05060 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.8■□□□□ 0.44
CHGBP05060 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.8■□□□□ 0.44
CHGBP05060 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.8■□□□□ 0.44
CHGBP05060 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.8■□□□□ 0.44
CHGBP05060 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.8■□□□□ 0.44
CHGBP05060 AC103988.2-201ENST00000561804 725 ntBASIC17.8■□□□□ 0.44
CHGBP05060 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.8■□□□□ 0.44
CHGBP05060 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.8■□□□□ 0.44
CHGBP05060 AC132192.2-201ENST00000596206 1147 ntBASIC17.8■□□□□ 0.44
CHGBP05060 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 AC022748.3-201ENST00000621828 275 ntBASIC17.8■□□□□ 0.44
CHGBP05060 AL008638.5-201ENST00000623814 1298 ntBASIC17.8■□□□□ 0.44
CHGBP05060 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHGBP05060 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.8■□□□□ 0.44
CHGBP05060 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.8■□□□□ 0.44
CHGBP05060 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.8■□□□□ 0.44
CHGBP05060 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.8■□□□□ 0.44
CHGBP05060 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHGBP05060 AC015688.4-201ENST00000580780 1647 ntBASIC17.8■□□□□ 0.44
CHGBP05060 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.79■□□□□ 0.44
CHGBP05060 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.79■□□□□ 0.44
CHGBP05060 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CHGBP05060 KRT8P28-201ENST00000433288 1390 ntBASIC17.79■□□□□ 0.44
CHGBP05060 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHGBP05060 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.79■□□□□ 0.44
CHGBP05060 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.79■□□□□ 0.44
CHGBP05060 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.79■□□□□ 0.44
CHGBP05060 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.79■□□□□ 0.44
CHGBP05060 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CHGBP05060 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.79■□□□□ 0.44
CHGBP05060 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.79■□□□□ 0.44
CHGBP05060 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.79■□□□□ 0.44
CHGBP05060 ALG3P1-201ENST00000508806 1114 ntBASIC17.79■□□□□ 0.44
CHGBP05060 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.79■□□□□ 0.44
CHGBP05060 DUX4L46-201ENST00000566845 751 ntBASIC17.79■□□□□ 0.44
CHGBP05060 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.79■□□□□ 0.44
CHGBP05060 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.79■□□□□ 0.44
CHGBP05060 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.79■□□□□ 0.44
CHGBP05060 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.79■□□□□ 0.44
CHGBP05060 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CHGBP05060 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHGBP05060 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHGBP05060 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms