Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 FAM86B3P-203ENST00000523992 854 ntBASIC21.09■□□□□ 0.97
POLR1AO95602 FTLP5-201ENST00000586853 534 ntBASIC21.09■□□□□ 0.97
POLR1AO95602 AP005264.6-204ENST00000588436 719 ntBASIC21.09■□□□□ 0.97
POLR1AO95602 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC21.09■□□□□ 0.97
POLR1AO95602 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
POLR1AO95602 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
POLR1AO95602 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1AO95602 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1AO95602 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC21.08■□□□□ 0.97
POLR1AO95602 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
POLR1AO95602 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1AO95602 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1AO95602 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1AO95602 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1AO95602 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1AO95602 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1AO95602 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1AO95602 HNRNPA1P58-201ENST00000403629 610 ntBASIC21.08■□□□□ 0.97
POLR1AO95602 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
POLR1AO95602 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC21.08■□□□□ 0.97
POLR1AO95602 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC21.08■□□□□ 0.97
POLR1AO95602 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
POLR1AO95602 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC21.08■□□□□ 0.97
POLR1AO95602 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC21.08■□□□□ 0.97
POLR1AO95602 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC21.08■□□□□ 0.97
POLR1AO95602 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC21.08■□□□□ 0.97
POLR1AO95602 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
POLR1AO95602 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC21.08■□□□□ 0.97
POLR1AO95602 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC21.08■□□□□ 0.97
POLR1AO95602 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR1AO95602 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR1AO95602 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
POLR1AO95602 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC21.08■□□□□ 0.96
POLR1AO95602 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
POLR1AO95602 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
POLR1AO95602 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
POLR1AO95602 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC21.08■□□□□ 0.96
POLR1AO95602 CICP14-201ENST00000629111 2732 ntBASIC21.08■□□□□ 0.96
POLR1AO95602 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
POLR1AO95602 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
POLR1AO95602 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC21.07■□□□□ 0.96
POLR1AO95602 ERP29P1-201ENST00000442902 706 ntBASIC21.07■□□□□ 0.96
POLR1AO95602 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC21.07■□□□□ 0.96
POLR1AO95602 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC21.07■□□□□ 0.96
POLR1AO95602 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC21.07■□□□□ 0.96
POLR1AO95602 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC21.07■□□□□ 0.96
POLR1AO95602 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
POLR1AO95602 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 AC018442.1-201ENST00000421439 2061 ntBASIC21.07■□□□□ 0.96
POLR1AO95602 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
POLR1AO95602 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC21.07■□□□□ 0.96
POLR1AO95602 AL360270.3-201ENST00000609118 1348 ntBASIC21.07■□□□□ 0.96
POLR1AO95602 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
POLR1AO95602 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC21.07■□□□□ 0.96
POLR1AO95602 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC21.07■□□□□ 0.96
POLR1AO95602 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC21.07■□□□□ 0.96
POLR1AO95602 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC21.07■□□□□ 0.96
POLR1AO95602 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 USB1-205ENST00000561743 1135 ntTSL 3 BASIC21.07■□□□□ 0.96
POLR1AO95602 ABHD17AP9-201ENST00000561925 548 ntBASIC21.07■□□□□ 0.96
POLR1AO95602 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
POLR1AO95602 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC21.06■□□□□ 0.96
POLR1AO95602 LINC00552-201ENST00000625151 2579 ntBASIC21.06■□□□□ 0.96
POLR1AO95602 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC21.06■□□□□ 0.96
POLR1AO95602 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC21.06■□□□□ 0.96
POLR1AO95602 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC21.06■□□□□ 0.96
POLR1AO95602 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
POLR1AO95602 AC007292.2-201ENST00000593524 1812 ntBASIC21.06■□□□□ 0.96
POLR1AO95602 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC21.06■□□□□ 0.96
POLR1AO95602 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC21.06■□□□□ 0.96
POLR1AO95602 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC21.06■□□□□ 0.96
POLR1AO95602 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
POLR1AO95602 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC21.06■□□□□ 0.96
POLR1AO95602 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC21.06■□□□□ 0.96
POLR1AO95602 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
POLR1AO95602 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms