Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SIX6O95475 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.52□□□□□ -0.41
SIX6O95475 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.52□□□□□ -0.41
SIX6O95475 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.52□□□□□ -0.41
SIX6O95475 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.52□□□□□ -0.41
SIX6O95475 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.52□□□□□ -0.41
SIX6O95475 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
SIX6O95475 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.52□□□□□ -0.41
SIX6O95475 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.52□□□□□ -0.41
SIX6O95475 AC010507.1-201ENST00000633895 436 ntBASIC12.52□□□□□ -0.41
SIX6O95475 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.52□□□□□ -0.41
SIX6O95475 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.52□□□□□ -0.41
SIX6O95475 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.52□□□□□ -0.41
SIX6O95475 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SIX6O95475 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SIX6O95475 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SIX6O95475 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.52□□□□□ -0.41
SIX6O95475 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.52□□□□□ -0.41
SIX6O95475 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.52□□□□□ -0.41
SIX6O95475 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 DNM1P41-201ENST00000623634 3350 ntBASIC12.52□□□□□ -0.41
SIX6O95475 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SIX6O95475 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.51□□□□□ -0.41
SIX6O95475 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.51□□□□□ -0.41
SIX6O95475 AC022497.1-201ENST00000624916 3691 ntBASIC12.51□□□□□ -0.41
SIX6O95475 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SIX6O95475 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SIX6O95475 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.51□□□□□ -0.41
SIX6O95475 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 RN7SL832P-201ENST00000607781 1756 ntBASIC12.51□□□□□ -0.41
SIX6O95475 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SIX6O95475 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SIX6O95475 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.51□□□□□ -0.41
SIX6O95475 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.51□□□□□ -0.41
SIX6O95475 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.51□□□□□ -0.41
SIX6O95475 ATP5G2P1-201ENST00000433580 426 ntBASIC12.51□□□□□ -0.41
SIX6O95475 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.51□□□□□ -0.41
SIX6O95475 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SIX6O95475 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.51□□□□□ -0.41
SIX6O95475 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.51□□□□□ -0.41
SIX6O95475 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.51□□□□□ -0.41
SIX6O95475 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.51□□□□□ -0.41
SIX6O95475 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.51□□□□□ -0.41
SIX6O95475 AL161645.1-201ENST00000622716 1255 ntBASIC12.51□□□□□ -0.41
SIX6O95475 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SIX6O95475 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.51□□□□□ -0.41
SIX6O95475 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.51□□□□□ -0.41
SIX6O95475 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SIX6O95475 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.51□□□□□ -0.41
SIX6O95475 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
SIX6O95475 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.51□□□□□ -0.41
SIX6O95475 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.51□□□□□ -0.41
SIX6O95475 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.51□□□□□ -0.41
SIX6O95475 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.51□□□□□ -0.41
SIX6O95475 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SIX6O95475 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SIX6O95475 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SIX6O95475 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SIX6O95475 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms