Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 PPY-202ENST00000587006 431 ntTSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 BX322562.1-201ENST00000617004 561 ntBASIC6.43□□□□□ -1.38
USH2AO75445 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC6.43□□□□□ -1.38
USH2AO75445 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 AC008741.2-201ENST00000612792 3115 ntBASIC6.43□□□□□ -1.38
USH2AO75445 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
USH2AO75445 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 SOD1-202ENST00000389995 865 ntTSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 PPP1R2P10-201ENST00000393023 595 ntBASIC6.43□□□□□ -1.38
USH2AO75445 UGT1A12P-201ENST00000447084 853 ntBASIC6.43□□□□□ -1.38
USH2AO75445 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC6.43□□□□□ -1.38
USH2AO75445 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 FUK-207ENST00000571514 3054 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 OR8T1P-201ENST00000421347 918 ntBASIC6.43□□□□□ -1.38
USH2AO75445 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC6.43□□□□□ -1.38
USH2AO75445 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
USH2AO75445 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC6.43□□□□□ -1.38
USH2AO75445 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
USH2AO75445 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC6.42□□□□□ -1.38
USH2AO75445 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 ZBED1P1-201ENST00000502364 1930 ntBASIC6.42□□□□□ -1.38
USH2AO75445 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 AL121753.2-201ENST00000624581 1461 ntBASIC6.42□□□□□ -1.38
USH2AO75445 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 HNRNPA1P59-201ENST00000430583 918 ntBASIC6.42□□□□□ -1.38
USH2AO75445 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 ALDOAP1-201ENST00000491506 1078 ntBASIC6.42□□□□□ -1.38
USH2AO75445 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC6.42□□□□□ -1.38
USH2AO75445 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
USH2AO75445 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC6.42□□□□□ -1.38
USH2AO75445 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms