Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SCN2BO60939 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 KLF2P2-201ENST00000416807 1039 ntBASIC14.17□□□□□ -0.14
SCN2BO60939 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.17□□□□□ -0.14
SCN2BO60939 PMS2P2-201ENST00000425039 1128 ntBASIC14.17□□□□□ -0.14
SCN2BO60939 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 AC093214.1-201ENST00000511688 1107 ntBASIC14.17□□□□□ -0.14
SCN2BO60939 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.17□□□□□ -0.14
SCN2BO60939 AC092552.1-201ENST00000547243 906 ntBASIC14.17□□□□□ -0.14
SCN2BO60939 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.17□□□□□ -0.14
SCN2BO60939 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.17□□□□□ -0.14
SCN2BO60939 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.17□□□□□ -0.14
SCN2BO60939 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.17□□□□□ -0.14
SCN2BO60939 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.17□□□□□ -0.14
SCN2BO60939 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SCN2BO60939 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 AC003102.2-201ENST00000589195 1469 ntBASIC14.17□□□□□ -0.14
SCN2BO60939 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SCN2BO60939 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SCN2BO60939 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SCN2BO60939 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
SCN2BO60939 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.16□□□□□ -0.14
SCN2BO60939 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.16□□□□□ -0.14
SCN2BO60939 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.16□□□□□ -0.14
SCN2BO60939 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.16□□□□□ -0.14
SCN2BO60939 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SCN2BO60939 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.16□□□□□ -0.14
SCN2BO60939 UGT1A2P-201ENST00000454886 866 ntBASIC14.16□□□□□ -0.14
SCN2BO60939 GIMAP3P-201ENST00000495150 836 ntBASIC14.16□□□□□ -0.14
SCN2BO60939 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.16□□□□□ -0.14
SCN2BO60939 AP001582.1-201ENST00000525856 295 ntBASIC14.16□□□□□ -0.14
SCN2BO60939 RFPL4AP1-201ENST00000530883 850 ntBASIC14.16□□□□□ -0.14
SCN2BO60939 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.16□□□□□ -0.14
SCN2BO60939 AC138761.1-201ENST00000584393 385 ntBASIC14.16□□□□□ -0.14
SCN2BO60939 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.16□□□□□ -0.14
SCN2BO60939 AC092364.2-202ENST00000597012 1073 ntBASIC14.16□□□□□ -0.14
SCN2BO60939 AC093726.1-201ENST00000608064 963 ntBASIC14.16□□□□□ -0.14
SCN2BO60939 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SCN2BO60939 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SCN2BO60939 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SCN2BO60939 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.16□□□□□ -0.14
SCN2BO60939 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SCN2BO60939 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.16□□□□□ -0.14
SCN2BO60939 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SCN2BO60939 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.15□□□□□ -0.14
SCN2BO60939 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SCN2BO60939 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.15□□□□□ -0.14
SCN2BO60939 AC090505.1-201ENST00000430515 1834 ntBASIC14.15□□□□□ -0.14
SCN2BO60939 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SCN2BO60939 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.15□□□□□ -0.14
SCN2BO60939 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SCN2BO60939 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.15□□□□□ -0.14
SCN2BO60939 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms