Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.66■□□□□ 0.1
OPHN1O60890 RPL7P3-201ENST00000441388 714 ntBASIC15.66■□□□□ 0.1
OPHN1O60890 AL355864.2-201ENST00000447420 863 ntBASIC15.66■□□□□ 0.1
OPHN1O60890 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.66■□□□□ 0.1
OPHN1O60890 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
OPHN1O60890 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.66■□□□□ 0.1
OPHN1O60890 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.66■□□□□ 0.1
OPHN1O60890 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.66■□□□□ 0.1
OPHN1O60890 AC079781.5-202ENST00000641784 3743 ntBASIC15.66■□□□□ 0.1
OPHN1O60890 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.66■□□□□ 0.1
OPHN1O60890 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
OPHN1O60890 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.66■□□□□ 0.1
OPHN1O60890 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 AC015656.1-201ENST00000624209 3578 ntBASIC15.66■□□□□ 0.1
OPHN1O60890 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
OPHN1O60890 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.66■□□□□ 0.1
OPHN1O60890 AC007787.1-201ENST00000588095 1583 ntBASIC15.66■□□□□ 0.1
OPHN1O60890 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.66■□□□□ 0.1
OPHN1O60890 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
OPHN1O60890 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
OPHN1O60890 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
OPHN1O60890 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
OPHN1O60890 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
OPHN1O60890 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
OPHN1O60890 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.65■□□□□ 0.1
OPHN1O60890 AC005229.1-201ENST00000392885 409 ntBASIC15.65■□□□□ 0.1
OPHN1O60890 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.65■□□□□ 0.1
OPHN1O60890 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.65■□□□□ 0.1
OPHN1O60890 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.65■□□□□ 0.1
OPHN1O60890 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.65■□□□□ 0.1
OPHN1O60890 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.65■□□□□ 0.1
OPHN1O60890 FAM86LP-201ENST00000478302 853 ntBASIC15.65■□□□□ 0.1
OPHN1O60890 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.65■□□□□ 0.1
OPHN1O60890 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.65■□□□□ 0.1
OPHN1O60890 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.65■□□□□ 0.1
OPHN1O60890 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.65■□□□□ 0.1
OPHN1O60890 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.65■□□□□ 0.1
OPHN1O60890 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.65■□□□□ 0.1
OPHN1O60890 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
OPHN1O60890 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.65■□□□□ 0.1
OPHN1O60890 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.65■□□□□ 0.1
OPHN1O60890 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.65■□□□□ 0.1
OPHN1O60890 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
OPHN1O60890 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
OPHN1O60890 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 AL360270.3-201ENST00000609118 1348 ntBASIC15.65■□□□□ 0.1
OPHN1O60890 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.65■□□□□ 0.1
OPHN1O60890 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
OPHN1O60890 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
OPHN1O60890 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
OPHN1O60890 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
OPHN1O60890 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
OPHN1O60890 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
OPHN1O60890 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
OPHN1O60890 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
OPHN1O60890 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
OPHN1O60890 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
OPHN1O60890 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
OPHN1O60890 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
OPHN1O60890 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
OPHN1O60890 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.64■□□□□ 0.09
OPHN1O60890 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
OPHN1O60890 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
OPHN1O60890 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.64■□□□□ 0.09
OPHN1O60890 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
OPHN1O60890 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.64■□□□□ 0.09
OPHN1O60890 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms