Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
LINC00473A8K010 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00473A8K010 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
LINC00473A8K010 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC00473A8K010 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00473A8K010 DFFBP1-201ENST00000433250 979 ntBASIC12.16□□□□□ -0.46
LINC00473A8K010 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00473A8K010 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00473A8K010 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.16□□□□□ -0.46
LINC00473A8K010 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00473A8K010 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC00473A8K010 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00473A8K010 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00473A8K010 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00473A8K010 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
LINC00473A8K010 AC009118.2-201ENST00000613275 655 ntBASIC12.16□□□□□ -0.46
LINC00473A8K010 AC005252.2-201ENST00000624630 1141 ntBASIC12.16□□□□□ -0.46
LINC00473A8K010 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00473A8K010 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC00473A8K010 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00473A8K010 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC00473A8K010 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00473A8K010 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00473A8K010 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
LINC00473A8K010 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00473A8K010 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.16□□□□□ -0.46
LINC00473A8K010 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 AC016397.2-201ENST00000624848 1985 ntBASIC12.16□□□□□ -0.46
LINC00473A8K010 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00473A8K010 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
LINC00473A8K010 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LINC00473A8K010 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00473A8K010 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
LINC00473A8K010 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LINC00473A8K010 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LINC00473A8K010 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LINC00473A8K010 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC00473A8K010 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 INGX-202ENST00000489074 768 ntBASIC12.15□□□□□ -0.46
LINC00473A8K010 SERBP1P5-201ENST00000510079 1181 ntBASIC12.15□□□□□ -0.46
LINC00473A8K010 RNA5SP421-201ENST00000516864 134 ntBASIC12.15□□□□□ -0.46
LINC00473A8K010 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.15□□□□□ -0.46
LINC00473A8K010 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 AC138761.1-201ENST00000584393 385 ntBASIC12.15□□□□□ -0.46
LINC00473A8K010 AL132655.2-201ENST00000596276 594 ntBASIC12.15□□□□□ -0.46
LINC00473A8K010 AC092364.2-202ENST00000597012 1073 ntBASIC12.15□□□□□ -0.46
LINC00473A8K010 AC004466.1-201ENST00000599515 1080 ntBASIC12.15□□□□□ -0.46
LINC00473A8K010 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 AC133539.2-201ENST00000604757 467 ntBASIC12.15□□□□□ -0.46
LINC00473A8K010 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 AP005019.2-201ENST00000615104 511 ntBASIC12.15□□□□□ -0.46
LINC00473A8K010 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC00473A8K010 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LINC00473A8K010 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 AC090505.1-201ENST00000430515 1834 ntBASIC12.15□□□□□ -0.46
LINC00473A8K010 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms