Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNCAIPQ9Y6H5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNCAIPQ9Y6H5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.91■■□□□ 1.9
SNCAIPQ9Y6H5 AC092803.2-201ENST00000564287 1899 ntBASIC26.91■■□□□ 1.9
SNCAIPQ9Y6H5 SLC6A10P-202ENST00000431994 2058 ntBASIC26.91■■□□□ 1.9
SNCAIPQ9Y6H5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.9■■□□□ 1.9
SNCAIPQ9Y6H5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.9■■□□□ 1.9
SNCAIPQ9Y6H5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.9■■□□□ 1.9
SNCAIPQ9Y6H5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNCAIPQ9Y6H5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SNCAIPQ9Y6H5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.89■■□□□ 1.9
SNCAIPQ9Y6H5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SNCAIPQ9Y6H5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
SNCAIPQ9Y6H5 AC241377.3-202ENST00000626088 1088 ntBASIC26.89■■□□□ 1.9
SNCAIPQ9Y6H5 AC241585.3-202ENST00000628937 1088 ntBASIC26.89■■□□□ 1.9
SNCAIPQ9Y6H5 AC245100.8-202ENST00000629247 1058 ntBASIC26.89■■□□□ 1.9
SNCAIPQ9Y6H5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.89■■□□□ 1.89
SNCAIPQ9Y6H5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNCAIPQ9Y6H5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNCAIPQ9Y6H5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNCAIPQ9Y6H5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SNCAIPQ9Y6H5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.88■■□□□ 1.89
SNCAIPQ9Y6H5 MIR6089-201ENST00000616698 64 ntBASIC26.88■■□□□ 1.89
SNCAIPQ9Y6H5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
SNCAIPQ9Y6H5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNCAIPQ9Y6H5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
SNCAIPQ9Y6H5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.87■■□□□ 1.89
SNCAIPQ9Y6H5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SNCAIPQ9Y6H5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SNCAIPQ9Y6H5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SNCAIPQ9Y6H5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SNCAIPQ9Y6H5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SNCAIPQ9Y6H5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SNCAIPQ9Y6H5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SNCAIPQ9Y6H5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.86■■□□□ 1.89
SNCAIPQ9Y6H5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
SNCAIPQ9Y6H5 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.86■■□□□ 1.89
SNCAIPQ9Y6H5 AL022069.1-201ENST00000568025 1636 ntBASIC26.86■■□□□ 1.89
SNCAIPQ9Y6H5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 AC233992.3-201ENST00000607491 485 ntBASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.85■■□□□ 1.89
SNCAIPQ9Y6H5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SNCAIPQ9Y6H5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.84■■□□□ 1.89
SNCAIPQ9Y6H5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.84■■□□□ 1.89
SNCAIPQ9Y6H5 MIR3181-201ENST00000578512 73 ntBASIC26.84■■□□□ 1.89
SNCAIPQ9Y6H5 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.84■■□□□ 1.89
SNCAIPQ9Y6H5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SNCAIPQ9Y6H5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNCAIPQ9Y6H5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNCAIPQ9Y6H5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.83■■□□□ 1.89
SNCAIPQ9Y6H5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SNCAIPQ9Y6H5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
SNCAIPQ9Y6H5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNCAIPQ9Y6H5 BX842568.3-201ENST00000418104 571 ntBASIC26.83■■□□□ 1.89
SNCAIPQ9Y6H5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.83■■□□□ 1.89
SNCAIPQ9Y6H5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNCAIPQ9Y6H5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
SNCAIPQ9Y6H5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.88
SNCAIPQ9Y6H5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
SNCAIPQ9Y6H5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNCAIPQ9Y6H5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNCAIPQ9Y6H5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNCAIPQ9Y6H5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNCAIPQ9Y6H5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNCAIPQ9Y6H5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNCAIPQ9Y6H5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNCAIPQ9Y6H5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNCAIPQ9Y6H5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.82■■□□□ 1.88
SNCAIPQ9Y6H5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SNCAIPQ9Y6H5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
SNCAIPQ9Y6H5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNCAIPQ9Y6H5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNCAIPQ9Y6H5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.81■■□□□ 1.88
SNCAIPQ9Y6H5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SNCAIPQ9Y6H5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.81■■□□□ 1.88
SNCAIPQ9Y6H5 AC009086.3-201ENST00000623486 1008 ntBASIC26.81■■□□□ 1.88
SNCAIPQ9Y6H5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
SNCAIPQ9Y6H5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNCAIPQ9Y6H5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNCAIPQ9Y6H5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
SNCAIPQ9Y6H5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.8■■□□□ 1.88
SNCAIPQ9Y6H5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.8■■□□□ 1.88
SNCAIPQ9Y6H5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.8■■□□□ 1.88
SNCAIPQ9Y6H5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
SNCAIPQ9Y6H5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SNCAIPQ9Y6H5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.79■■□□□ 1.88
SNCAIPQ9Y6H5 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.79■■□□□ 1.88
SNCAIPQ9Y6H5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.79■■□□□ 1.88
SNCAIPQ9Y6H5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SNCAIPQ9Y6H5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.79■■□□□ 1.88
SNCAIPQ9Y6H5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms